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\n@claude please resolve.",{},"created",1763471361.4088259,"Completing the 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backup and restore tools for PostgreSQL and MySQL.","Provides automated backup, restore, and scheduling functionality for","homelab database instances.","\"\"\"","from __future__ import annotations","import asyncio","import json","import os","import logging","import shlex","from typing import Dict, Any, Optional, List","from datetime import datetime","from pathlib import Path","import subprocess","from asyncio import to_thread","from fastmcp import FastMCP","from src.utils.audit import AuditLogger","from src.auth.middleware import secure_tool","from src.server.utils import format_error","from pydantic import BaseModel","audit = AuditLogger()","logger = logging.getLogger(__name__)","class BackupConfig(BaseModel):"," \"\"\"Configuration for database backups.\"\"\""," database_type: str # postgresql, mysql"," host: str = \"localhost\""," port: Optional[int] = None"," database: Optional[str] = None # None means all databases"," username: str"," password: Optional[str] = None"," backup_path: str = \"/var/backups/databases\""," retention_days: int = 7"," compress: bool = True","class BackupResult(BaseModel):"," \"\"\"Result of a backup operation.\"\"\""," success: bool"," backup_file: Optional[str] = None"," size_bytes: Optional[int] = None"," duration_seconds: Optional[float] = None"," error: Optional[str] = None"," timestamp: datetime = None","class RestoreResult(BaseModel):"," \"\"\"Result of a restore operation.\"\"\""," restored_database: Optional[str] = None","async def backup_postgresql("," host: str = \"localhost\","," port: int = 5432,"," database: Optional[str] = None,"," username: str = \"postgres\","," password: Optional[str] = None,"," backup_path: str = \"/var/backups/databases\",",") -> Dict[str, Any]:"," \"\"\"Backup PostgreSQL database(s)."," Args:"," host: Database host"," port: Database port"," database: Specific database to backup (None for all)"," username: Database username"," password: Database password (uses PGPASSWORD env var)"," backup_path: Path to store backups"," compress: Whether to compress the backup"," Returns:"," BackupResult with backup file path and metadata"," \"\"\""," start_time = datetime.now()"," timestamp = start_time.strftime(\"%Y%m%d_%H%M%S\")"," # Ensure backup directory exists"," Path(backup_path).mkdir(parents=True, exist_ok=True)"," # Build backup filename"," db_name = database or \"all_databases\""," if database:"," if compress:"," backup_file = f\"{backup_path}/postgresql_{db_name}_{timestamp}.sql.gz\""," else:"," backup_file = f\"{backup_path}/postgresql_{db_name}_{timestamp}.dump\""," else:"," backup_file = f\"{backup_path}/postgresql_{db_name}_{timestamp}.sql\""," backup_file += \".gz\""," try:"," # Set up environment"," env = os.environ.copy()"," if password:"," env[\"PGPASSWORD\"] = password"," # Build command"," if database:"," # Backup single database"," base_cmd = ["," \"pg_dump\","," \"-h\", host,"," \"-p\", str(port),"," \"-U\", username,"," ]"," if compress:"," base_cmd.append(database)"," cmd_str = \" \".join(shlex.quote(arg) for arg in base_cmd) + f\" | gzip > {shlex.quote(backup_file)}\""," result = await to_thread("," subprocess.run,"," cmd_str,"," shell=True,"," env=env,"," capture_output=True,"," text=True,"," check=True"," )"," else:"," base_cmd.extend([\"-F\", \"c\", \"-f\", backup_file, database])"," base_cmd,"," # Backup all databases"," \"pg_dumpall\","," base_cmd.extend([\"-f\", backup_file])"," # Get backup file size"," size_bytes = os.path.getsize(backup_file)"," duration = (datetime.now() - start_time).total_seconds()"," backup_result = BackupResult("," success=True,"," backup_file=backup_file,"," size_bytes=size_bytes,"," duration_seconds=duration,"," timestamp=start_time"," )"," audit.log(\"backup_postgresql\", {"," \"host\": host,"," \"database\": database,"," \"backup_file\": backup_file"," }, {"," \"success\": True,"," \"size_bytes\": size_bytes,"," \"duration_seconds\": duration"," })"," return backup_result.dict()"," except subprocess.CalledProcessError as e:"," error_msg = f\"Backup failed: {e.stderr}\""," success=False,"," error=error_msg,"," \"database\": database"," \"success\": False,"," \"error\": error_msg"," except Exception as e:"," error_msg = f\"Backup failed: {str(e)}\"","async def backup_mysql("," port: int = 3306,"," username: str = \"root\","," \"\"\"Backup MySQL/MariaDB database(s)."," password: Database password"," backup_file = f\"{backup_path}/mysql_{db_name}_{timestamp}.sql\""," if compress:"," backup_file += \".gz\""," cmd = ["," \"mysqldump\","," \"-h\", host,"," \"-P\", str(port),"," \"-u\", username,"," ]"," cmd.extend([f\"-p{password}\"])"," # Add options"," cmd.extend(["," \"--single-transaction\","," \"--quick\","," \"--lock-tables=false\","," ])"," cmd.append(database)"," cmd.append(\"--all-databases\")"," # Execute backup with optional compression"," cmd_str = \" \".join(cmd) + f\" | gzip > {backup_file}\""," result = await to_thread("," subprocess.run,"," cmd_str,"," shell=True,"," capture_output=True,"," text=True,"," check=True"," )"," cmd.extend([\"-r\", backup_file])"," cmd,"," audit.log(\"backup_mysql\", {","async def restore_postgresql("," backup_file: str,"," drop_existing: bool = False"," \"\"\"Restore PostgreSQL database from backup."," backup_file: Path to backup file"," database: Target database name (for single DB restores)"," drop_existing: Whether to drop existing database before restore"," RestoreResult with success status and metadata"," if not os.path.exists(backup_file):"," return RestoreResult("," error=f\"Backup file not found: {backup_file}\""," ).dict()"," # Determine if it's a custom format or SQL dump"," is_custom_format = backup_file.endswith(\".dump\") or not backup_file.endswith((\".sql\", \".sql.gz\"))"," if is_custom_format and database:"," # Restore custom format to specific database"," cmd = ["," \"pg_restore\","," \"-d\", database,"," if drop_existing:"," cmd.append(\"-c\") # Clean (drop) database objects before recreating"," cmd.append(backup_file)"," elif backup_file.endswith(\".gz\"):"," # Restore gzipped SQL dump"," if database:"," cmd_str = f\"gunzip -c {backup_file} | psql -h {host} -p {port} -U {username} -d {database}\""," cmd_str = f\"gunzip -c {backup_file} | psql -h {host} -p {port} -U {username}\""," env=env,"," duration = (datetime.now() - start_time).total_seconds()"," restore_result = RestoreResult("," success=True,"," restored_database=database or \"all\","," duration_seconds=duration"," audit.log(\"restore_postgresql\", {"," \"backup_file\": backup_file,"," \"database\": database"," }, {"," \"success\": True,"," \"duration_seconds\": duration"," })"," return restore_result.dict()"," # Restore plain SQL dump"," \"psql\","," cmd.extend([\"-d\", database])"," cmd.extend([\"-f\", backup_file])"," result = await to_thread("," subprocess.run,"," cmd,"," env=env,"," capture_output=True,"," text=True,"," check=True"," restore_result = RestoreResult("," restored_database=database or \"all\","," duration_seconds=duration"," audit.log(\"restore_postgresql\", {"," \"backup_file\": backup_file,"," return restore_result.dict()"," error_msg = f\"Restore failed: {e.stderr}\""," error=error_msg"," error_msg = f\"Restore failed: {str(e)}\"","async def restore_mysql("," \"\"\"Restore MySQL/MariaDB database from backup."," database: Target database name"," \"mysql\","," cmd.append(f\"-p{password}\")"," # Handle compressed backups"," if backup_file.endswith(\".gz\"):"," cmd_str = \" \".join(cmd) + f\" < <(gunzip -c {backup_file})\""," executable=\"/bin/bash\","," cmd_str = \" \".join(cmd) + f\" < {backup_file}\""," audit.log(\"restore_mysql\", {","async def list_backups("," database_type: Optional[str] = None",") -> List[Dict[str, Any]]:"," \"\"\"List available database backups."," backup_path: Path to backup directory"," database_type: Filter by database type (postgresql, mysql)"," List of backup files with metadata"," backups = []"," if not os.path.exists(backup_path):"," return backups"," for file in os.listdir(backup_path):"," file_path = os.path.join(backup_path, file)"," # Filter by database type if specified"," if database_type:"," if database_type == \"postgresql\" and not file.startswith(\"postgresql_\"):"," continue"," if database_type == \"mysql\" and not file.startswith(\"mysql_\"):"," # Get file metadata"," stat = os.stat(file_path)"," backups.append({"," \"filename\": file,"," \"path\": file_path,"," \"size_bytes\": stat.st_size,"," \"created_at\": datetime.fromtimestamp(stat.st_ctime).isoformat(),"," \"modified_at\": datetime.fromtimestamp(stat.st_mtime).isoformat()"," # Sort by creation time (newest first)"," backups.sort(key=lambda x: x[\"created_at\"], reverse=True)"," audit.log(\"list_backups\", {"," \"backup_path\": backup_path,"," \"database_type\": database_type"," \"count\": len(backups)"," return backups"," \"error\": str(e)","async def cleanup_old_backups("," retention_days: int = 7,"," database_type: Optional[str] = None,"," dry_run: bool = True"," \"\"\"Clean up old database backups based on retention policy."," retention_days: Number of days to retain backups"," dry_run: If True, only list files that would be deleted"," Dict with cleanup results"," from datetime import timedelta"," deleted_files = []"," errors = []"," total_space_freed = 0"," return {"," \"dry_run\": dry_run,"," \"deleted_count\": 0,"," \"space_freed_bytes\": 0,"," \"deleted_files\": []"," }"," cutoff_time = datetime.now() - timedelta(days=retention_days)"," # Check file age"," file_time = datetime.fromtimestamp(stat.st_mtime)"," if file_time < cutoff_time:"," if not dry_run:"," try:"," os.remove(file_path)"," total_space_freed += stat.st_size"," deleted_files.append(file)"," except Exception as e:"," errors.append(f\"Failed to delete {file}: {str(e)}\")"," else:"," total_space_freed += stat.st_size"," deleted_files.append(file)"," result = {"," \"success\": len(errors) == 0,"," \"dry_run\": dry_run,"," \"deleted_count\": len(deleted_files),"," \"space_freed_bytes\": total_space_freed,"," \"deleted_files\": deleted_files,"," \"errors\": errors"," }"," audit.log(\"cleanup_old_backups\", {"," \"retention_days\": retention_days,"," \"database_type\": database_type,"," \"dry_run\": dry_run"," }, result)"," return result"," \"retention_days\": retention_days"," return {"," \"error\": str(e),","def register_tools(mcp: FastMCP):"," \"\"\"Register database backup and restore tools with MCP instance.\"\"\""," @mcp.tool()"," @secure_tool(\"database:backup\")"," async def backup_database("," database_type: str,"," host: str = \"localhost\","," port: int = None,"," database: str = None,"," username: str = None,"," password: str = None,"," backup_path: str = \"/var/backups/databases\","," compress: bool = True"," ) -> dict:"," \"\"\"Backup PostgreSQL or MySQL database."," Args:"," database_type: Database type (postgresql or mysql)"," host: Database host (default: localhost)"," port: Database port (default: 5432 for PostgreSQL, 3306 for MySQL)"," database: Specific database to backup (None for all databases)"," username: Database username (default: postgres/root)"," password: Database password (optional, will use environment variable if not provided)"," backup_path: Path to store backups (default: /var/backups/databases)"," compress: Whether to compress the backup (default: True)"," Returns:"," BackupResult with backup file path and metadata"," \"\"\""," try:"," if database_type == \"postgresql\":"," result = await backup_postgresql("," host=host,"," port=port or 5432,"," database=database,"," username=username or \"postgres\","," password=password,"," backup_path=backup_path,"," compress=compress"," elif database_type == \"mysql\":"," result = await backup_mysql("," port=port or 3306,"," username=username or \"root\","," return {\"error\": f\"Invalid database_type: {database_type}. Must be 'postgresql' or 'mysql'\"}"," return result"," except Exception as e:"," return format_error(e, \"backup_database\")"," @secure_tool(\"database:restore\")"," async def restore_database("," backup_file: str,"," drop_existing: bool = False"," \"\"\"Restore PostgreSQL or MySQL database from backup."," backup_file: Path to backup file"," database: Target database name (required for single database restores)"," password: Database password (optional)"," drop_existing: Whether to drop existing database before restore (PostgreSQL only)"," RestoreResult with success status and metadata"," result = await restore_postgresql("," backup_file=backup_file,"," drop_existing=drop_existing"," result = await restore_mysql("," password=password"," return format_error(e, \"restore_database\")"," @secure_tool(\"database:read\")"," async def list_database_backups("," database_type: str = None"," ) -> list:"," \"\"\"List available database backups."," backup_path: Path to backup directory (default: /var/backups/databases)"," database_type: Filter by database type (postgresql or mysql, optional)"," List of backup files with metadata"," result = await list_backups("," backup_path=backup_path,"," database_type=database_type"," return format_error(e, \"list_database_backups\")"," @secure_tool(\"database:admin\")"," async def cleanup_database_backups("," retention_days: int = 7,"," database_type: str = None,"," dry_run: bool = True"," \"\"\"Clean up old database backups based on retention policy."," retention_days: Number of days to retain backups (default: 7)"," dry_run: If True, only list files that would be deleted (default: True)"," Dict with cleanup results including deleted files and space freed"," result = await cleanup_old_backups("," retention_days=retention_days,"," database_type=database_type,"," dry_run=dry_run"," return format_error(e, \"cleanup_database_backups\")"," logger.info(\"Registered 4 database tools\")","src/tools/stack_tools.py",[1522],{"_1098":293,"_1099":1523,"_396":1524,"_1102":57},545,[1107,177,1108,1109,1110,1525,1114,177,1526,1527,1528,1529,1530,1531,1532,1533,1534,1535,1536,1537,1119,1116,1117,177,177,1123,177,177,1538,1539,177,1540,1541,1166,1542,1543,1544,1545,1546,1547,1548,177,1549,1550,1551,177,177,1552,1553,1554,1166,1542,1543,1555,1556,1557,1558,1559,1560,1561,1562,1563,1564,1565,177,1566,1567,1568,1569,177,1570,177,1571,1572,177,177,1573,1574,1542,1543,1575,177,1576,1577,1578,177,1579,1580,1581,1582,177,1583,1584,1585,1586,1587,1588,1589,1222,1590,1591,177,1181,1592,1593,1324,1594,1595,1327,1328,1329,1222,177,1596,1597,1324,1598,1595,1327,1328,1329,1222,1599,177,1600,1601,1324,1602,1595,1327,1328,1329,1222,1603,177,1604,1605,1324,1606,1595,1327,1328,1329,1222,1607,177,1608,1609,1324,1610,1595,1327,1328,1329,1222,1611,177,1585,1586,1587,1612,1613,1614,1615,1616,1222,177,1617,1591,177,1240,1618,1585,1586,1587,1588,1589,1222,1619,1591,177,177,1620,1621,1622,1623,1624,177,177,1625,1626,177,1627,1628,1629,1630,1631,1166,1393,1632,177,1633,1542,1543,1634,177,1635,1636,1637,1579,177,1638,1639,1640,1641,1642,177,1643,1644,1645,1646,1647,1178,1648,177,1649,1650,177,1651,1652,177,1653,177,1654,1655,1656,1642,177,1657,1181,1658,1659,177,1660,1661,1662,177,1663,1664,1665,1666,1667,177,1668,1669,1176,1670,177,1671,1672,1673,1268,1674,1675,1271,1272,1273,1274,1676,1268,1677,1675,1271,1272,1273,1274,1176,1678,1679,1268,1680,1271,1272,1273,1274,177,1681,1682,1683,1199,1684,1685,1203,1204,1205,1206,177,1686,1687,1324,1602,1595,1327,1328,1329,1222,1688,177,1689,1690,1691,1268,1692,1675,1271,1272,1273,1274,177,1693,1694,1324,1695,1595,1327,1328,1329,1222,177,1696,1697,1698,1699,1700,1701,177,1702,1217,1703,1704,1705,1589,1222,177,1706,1228,1707,1708,1231,177,1233,1709,1710,1702,1235,1703,1704,1711,1712,1222,1706,1238,1382,1231,1240,1713,1702,1235,1703,1704,1711,1712,1222,1706,1238,1382,1231,177,1714,177,177,1715,1716,1393,1717,1718,1719,1720,177,1721,1722,1723,1591,177,1724,1725,1559,1558,1726,1727,1728,1729,1565,177,1730,1731,1732,177,177,1733,1734,1735,1736,177,177,1737,1738,1739,1740,1741,177,177,1742,1743,177,1744,1745,1746,1747,1748,1749,1750,1166,1542,1543,1751,177,1752,177,1753,1754,1459,1755,1756,1757,1758,1759,1760,177,1761,177,1762,1181,1763,177,1764,1765,1766,1767,1768,1769,1770,177,1771,1772,1773,1774,1775,1776,1777,1778,1779,1780,1459,1781,1782,1783,1784,1785,1786,1787,1788,1789,1790,1791,1792,1793,1794,1795,1796,1365,1759,1797,1798,1799,177,1800,1801,1802,1803,1804,1805,1806,1807,1808,1809,177,1810,1811,1812,1813,1814,1815,1816,1777,1817,1818,1819,1820,1821,1822,177,1823,177,1824,1825,1826,1827,1828,1829,1830,1831,1422,1832,177,1833,1834,1835,1836,1837,177,1838,177,1839,1840],"from typing import List, Optional, Dict, Any","from src.inventory import Inventory, HostMetadata, StackMetadata","from src.models.stack_models import ("," StackMeta,"," StackStatus,"," ServiceSummary,"," RepoStatus,"," ConfigDiff,"," DeployRequest,"," DeployResult,"," SimulateActionResult,"," StackHistoryEntry,",")","async def inventory_stacks(host: Optional[str] = None, format: Optional[str] = None) -> List[Dict[str, Any]]:"," \"\"\"Return list of stacks from inventory. If `host` provided, filter by host."," Default output is structured JSON (or compact TOON if higher-level wrapper"," asks for `format='toon'`). This function is intentionally read-only."," inv = Inventory()"," stacks = inv.list_stacks()"," res = []"," for sid, s in stacks.items():"," if host and s.get(\"host\") != host:"," continue"," res.append(s)"," # Audit the read"," audit.log(\"inventory_stacks\", {\"host\": host}, {\"success\": True, \"count\": len(res)})"," return res","async def get_stack_status(host: str, stack_name: str, format: Optional[str] = None) -> Dict[str, Any]:"," \"\"\"Return a structured StackStatus summary. Currently a conservative"," summary built from inventory plus light runtime inspection (placeholders)."," key = stack_name"," stack = stacks.get(key) if key in stacks else None"," meta = StackMeta("," stack_name=stack_name,"," host=host,"," path=stack.get(\"path\") if stack else None,"," repo_url=stack.get(\"repo_url\") if stack else None,"," branch=stack.get(\"branch\") if stack else None,"," deployed_commit=stack.get(\"deployed_commit\") if stack else None,"," services=stack.get(\"services\") if stack else [],"," )"," # Placeholder: no real container inspection here. Provide empty service summaries."," services: List[ServiceSummary] = []"," for sname in meta.services or []:"," services.append(ServiceSummary(name=sname, status=\"unknown\"))"," status = StackStatus(meta=meta, services=services, issues=[])"," audit.log(\"get_stack_status\", {\"host\": host, \"stack_name\": stack_name}, {\"success\": True})"," return status.dict()","async def get_repo_status(stack_name: str) -> Dict[str, Any]:"," \"\"\"Return repo status for a stack with actual git information.\"\"\""," stack = stacks.get(stack_name)"," if not stack:"," audit.log(\"get_repo_status\", {\"stack_name\": stack_name}, {\"success\": False, \"error\": \"stack_not_found\"})"," return RepoStatus(repo_url=None).dict()"," repo_url = stack.get(\"repo_url\")"," stack_path = stack.get(\"path\")"," deployed_commit = stack.get(\"deployed_commit\")"," branch = stack.get(\"branch\", \"main\")"," # If no path or git repo doesn't exist, return basic info"," if not stack_path or not os.path.exists(os.path.join(stack_path, \".git\")):"," res = RepoStatus("," repo_url=repo_url,"," branch=branch,"," latest_commit=None,"," deployed_commit=deployed_commit"," audit.log(\"get_repo_status\", {\"stack_name\": stack_name}, {\"success\": True, \"no_git\": True})"," return res.dict()"," # Get latest commit from remote"," await to_thread("," [\"git\", \"fetch\", \"origin\", branch],"," cwd=stack_path,"," # Get remote HEAD commit"," remote_rev = await to_thread("," [\"git\", \"rev-parse\", f\"origin/{branch}\"],"," latest_commit = remote_rev.stdout.strip()"," # Get current HEAD commit"," local_rev = await to_thread("," [\"git\", \"rev-parse\", \"HEAD\"],"," current_commit = local_rev.stdout.strip()"," # Check if there are uncommitted changes"," status_result = await to_thread("," [\"git\", \"status\", \"--porcelain\"],"," has_uncommitted_changes = bool(status_result.stdout.strip())"," # Calculate ahead/behind"," revlist = await to_thread("," [\"git\", \"rev-list\", \"--left-right\", \"--count\", f\"HEAD...origin/{branch}\"],"," ahead, behind = map(int, revlist.stdout.strip().split())"," latest_commit=latest_commit,"," deployed_commit=current_commit,"," ahead_by=ahead,"," behind_by=behind,"," has_uncommitted_changes=has_uncommitted_changes"," audit.log(\"get_repo_status\", {\"stack_name\": stack_name}, {\"success\": True})"," # Fall back to basic info if git commands fail"," audit.log(\"get_repo_status\", {\"stack_name\": stack_name}, {\"success\": False, \"error\": str(e)})","async def get_config_diff(stack_name: str) -> Dict[str, Any]:"," \"\"\"Compute config diff between deployed and source. Placeholder returns empty diff.\"\"\""," cd = ConfigDiff(stack_name=stack_name, diff_text=\"\", compact_delta={})"," audit.log(\"get_config_diff\", {\"stack_name\": stack_name}, {\"success\": True})"," return cd.dict()","async def deploy_stack(req: DeployRequest) -> Dict[str, Any]:"," \"\"\"Perform a git-based stack deployment with docker-compose."," This function:"," - Clones or updates a git repository"," - Checks out the specified commit/branch"," - Runs docker-compose up (with optional image pull)"," - Updates inventory with deployed commit info"," planned = []"," # Get stack info from inventory"," stack = stacks.get(req.stack_name, {})"," # Determine deployment path"," deploy_base = os.getenv(\"STACK_DEPLOY_PATH\", \"/opt/stacks\")"," stack_path = stack.get(\"path\") or os.path.join(deploy_base, req.stack_name)"," if not repo_url:"," errors.append(f\"No repo_url configured for stack {req.stack_name}\")"," result = DeployResult(success=False, dry_run=req.dry_run, planned_changes=planned, errors=errors, deployed_commit=None)"," audit.log(\"deploy_stack\", req.dict(), {\"success\": False, \"error\": \"no_repo_url\"})"," return result.dict()"," # Plan the deployment"," repo_exists = os.path.exists(os.path.join(stack_path, \".git\"))"," if repo_exists:"," planned.append(f\"Update repository in {stack_path}\")"," planned.append(f\"Fetch latest changes from {repo_url}\")"," planned.append(f\"Clone repository {repo_url} to {stack_path}\")"," if req.target_commit:"," planned.append(f\"Checkout commit/branch: {req.target_commit}\")"," if req.pull_images:"," planned.append(f\"Pull Docker images for {req.stack_name}\")"," planned.append(f\"Run docker-compose up -d for {req.stack_name}\")"," if req.dry_run:"," result = DeployResult(success=True, dry_run=True, planned_changes=planned, errors=[], deployed_commit=req.target_commit)"," audit.log(\"deploy_stack\", req.dict(), {\"success\": True, \"dry_run\": True})"," # Execute deployment"," # Ensure base directory exists"," os.makedirs(deploy_base, exist_ok=True)"," # Clone or update repository"," default_branch = stack.get(\"branch\", \"main\")"," target_ref = req.target_commit or default_branch"," def looks_like_sha(ref: Optional[str]) -> bool:"," if not ref:"," return False"," ref = ref.strip()"," return 7 <= len(ref) <= 40 and all(c in \"0123456789abcdef\" for c in ref.lower())"," if req.target_commit and looks_like_sha(req.target_commit):"," checkout_target = req.target_commit"," checkout_target = f\"origin/{target_ref}\""," if repo_exists:"," # Update existing repo"," git_fetch = await to_thread("," [\"git\", \"fetch\", \"--all\"],"," cwd=stack_path,"," git_reset = await to_thread("," [\"git\", \"reset\", \"--hard\", checkout_target],"," # Clone new repo"," git_clone = await to_thread("," [\"git\", \"clone\", repo_url, stack_path],"," checkout_value = req.target_commit or stack.get(\"branch\")"," if checkout_value:"," git_checkout = await to_thread("," [\"git\", \"checkout\", checkout_value],"," cwd=stack_path,"," # Get current commit hash"," git_rev = await to_thread("," deployed_commit = git_rev.stdout.strip()"," # Pull images if requested"," if req.pull_images:"," compose_pull = await to_thread("," [\"docker\", \"compose\", \"pull\"],"," # Deploy with docker-compose"," compose_up = await to_thread("," [\"docker\", \"compose\", \"up\", \"-d\", \"--remove-orphans\"],"," # Update inventory"," stack[\"deployed_commit\"] = deployed_commit"," stack[\"path\"] = stack_path"," stack[\"deployed_at\"] = datetime.now().isoformat()"," inv._data[\"stacks\"][req.stack_name] = stack"," inv._save()"," result = DeployResult("," dry_run=False,"," planned_changes=planned,"," errors=[],"," audit.log(\"deploy_stack\", req.dict(), {"," \"deployed_commit\": deployed_commit,"," \"stack_path\": stack_path"," errors.append(f\"Command failed: {e.cmd}\")"," errors.append(f\"Error: {e.stderr}\")"," errors=errors,"," deployed_commit=None"," errors.append(f\"Deployment failed: {str(e)}\")"," return result.dict()","async def rollback_stack(host: str, stack_name: str, to_commit: str, dry_run: bool = True) -> Dict[str, Any]:"," \"\"\"Rollback a stack to a previous commit.\"\"\""," planned = ["," f\"Checkout commit {to_commit} for {stack_name}\","," f\"Redeploy {stack_name} with docker-compose\""," ]"," if dry_run:"," res = DeployResult(success=True, dry_run=True, planned_changes=planned, errors=[], deployed_commit=to_commit)"," audit.log(\"rollback_stack\", {\"host\": host, \"stack_name\": stack_name, \"to_commit\": to_commit}, {\"success\": True, \"dry_run\": True})"," # Execute rollback via deploy_stack"," deploy_req = DeployRequest("," target_commit=to_commit,"," pull_images=False,"," force=True,"," dry_run=False"," result = await deploy_stack(deploy_req)"," audit.log(\"rollback_stack\", {\"host\": host, \"stack_name\": stack_name, \"to_commit\": to_commit}, {\"success\": result.get(\"success\"), \"dry_run\": False})"," return result","async def get_stack_history(stack_name: str, limit: int = 20) -> List[Dict[str, Any]]:"," # Placeholder: in-memory or inventory-backed history not implemented; return empty"," audit.log(\"get_stack_history\", {\"stack_name\": stack_name, \"limit\": limit}, {\"success\": True})"," return []","async def simulate_action(stack_name: str, action: str) -> Dict[str, Any]:"," # Minimal impact simulation: looks up inventory dependencies (not implemented)"," sim = SimulateActionResult(impacted_stacks=[], risk_level=\"low\", details={\"note\": \"No dependency graph configured\"})"," audit.log(\"simulate_action\", {\"stack_name\": stack_name, \"action\": action}, {\"success\": True})"," return sim.dict()","async def get_stack_network_info(host: str, stack_name: str) -> Dict[str, Any]:"," \"\"\"Return port bindings, published ports, network mode, and detect host-port conflicts."," Strategy:"," - Attempt to use docker-py if available to list containers for the compose project"," (label `com.docker.compose.project==`), otherwise fall back to"," `docker ps` + `docker inspect` via the CLI."," - Collect for each container: container_id, name, service (best-effort), image,"," network_mode, port_bindings (host_port -> container_port/proto), mounts."," - Detect conflicts where multiple containers bind the same host port."," stack = stacks.get(stack_name, {})"," results: Dict[str, Any] = {\"stack_name\": stack_name, \"host\": host, \"containers\": [], \"port_conflicts\": []}"," # Helper: inspect container via docker inspect CLI"," def _inspect_container_cli(container_id: str) -> Optional[Dict[str, Any]]:"," p = subprocess.run([\"docker\", \"inspect\", container_id], capture_output=True, text=True, check=True)"," data = json.loads(p.stdout)"," if data and isinstance(data, list):"," return data[0]"," except Exception:"," return None"," containers_info: List[Dict[str, Any]] = []"," # Try docker SDK first"," import docker"," client = docker.from_env()"," # Try to find containers by compose project label"," filters = {\"label\": f\"com.docker.compose.project={stack_name}\"}"," found = client.containers.list(all=True, filters=filters)"," if not found:"," # fallback: match containers whose name begins with stack_name"," found = [c for c in client.containers.list(all=True) if c.name.startswith(stack_name + \"_\")]"," for c in found:"," try:"," ci = c.attrs"," except Exception:"," ci = _inspect_container_cli(c.id)"," if not ci:"," continue"," containers_info.append(ci)"," except Exception:"," # Docker SDK not available; fall back to CLI"," # List containers with names and ids"," p = subprocess.run([\"docker\", \"ps\", \"-a\", \"--format\", \"{{json .}}\"], capture_output=True, text=True, check=True)"," lines = [l for l in p.stdout.splitlines() if l.strip()]"," for ln in lines:"," try:"," item = json.loads(ln)"," name = item.get(\"Names\") or item.get(\"Name\") or \"\""," cid = item.get(\"ID\") or item.get(\"Id\") or item.get(\"ContainerID\") or \"\""," if not cid:"," continue"," # Filter by stack_name match"," if name.startswith(stack_name + \"_\") or name == stack_name:"," ci = _inspect_container_cli(cid)"," if ci:"," containers_info.append(ci)"," except Exception:"," # No docker access"," audit.log(\"get_stack_network_info\", {\"host\": host, \"stack_name\": stack_name}, {\"success\": False, \"error\": \"docker unavailable\"})"," return {\"error\": \"docker unavailable or permission denied\"}"," # Parse container infos"," host_port_map: Dict[str, List[Dict[str, Any]]] = {}"," for ci in containers_info:"," cid = ci.get(\"Id\")"," name = ci.get(\"Name\") or (ci.get(\"Name\") if ci.get(\"Name\") else None)"," # Try to determine service name from labels (compose overrides)"," labels = ci.get(\"Config\", {}).get(\"Labels\", {}) if isinstance(ci.get(\"Config\"), dict) else {}"," service = labels.get(\"com.docker.compose.service\") or labels.get(\"com.docker.compose.project\")"," image = ci.get(\"Config\", {}).get(\"Image\") if isinstance(ci.get(\"Config\"), dict) else ci.get(\"Image\")"," network_mode = ci.get(\"HostConfig\", {}).get(\"NetworkMode\") if isinstance(ci.get(\"HostConfig\"), dict) else None"," ports = []"," ns = ci.get(\"NetworkSettings\", {}) or {}"," port_bindings = ns.get(\"Ports\") if isinstance(ns.get(\"Ports\"), dict) else {}"," for container_port_proto, host_bind in (port_bindings or {}).items():"," # container_port_proto example: \"80/tcp\""," if host_bind is None:"," # not published"," for hb in host_bind:"," host_ip = hb.get(\"HostIp\")"," host_port = hb.get(\"HostPort\")"," cp = container_port_proto"," ports.append({\"host_ip\": host_ip, \"host_port\": host_port, \"container_port\": cp})"," host_port_map.setdefault(str(host_port), []).append({\"container_id\": cid, \"name\": name, \"service\": service, \"stack\": stack_name})"," mounts = ci.get(\"Mounts\") or []"," containers_entry = {"," \"container_id\": cid,"," \"name\": name,"," \"service\": service,"," \"image\": image,"," \"network_mode\": network_mode,"," \"ports\": ports,"," \"mounts\": mounts,"," results[\"containers\"].append(containers_entry)"," # Detect conflicts: host ports mapped by multiple containers"," conflicts = []"," for host_p, bindings in host_port_map.items():"," if len(bindings) > 1:"," conflicts.append({\"host_port\": host_p, \"bindings\": bindings})"," results[\"port_conflicts\"] = conflicts"," audit.log(\"get_stack_network_info\", {\"host\": host, \"stack_name\": stack_name}, {\"success\": True, \"count\": len(results[\"containers\"])})"," return results","message",[1843,1844,1845,1846,1847,1848],{"_412":45,"_45":1859},{"_412":1853,"_1091":1520,"_1098":1857,"_1099":1858},{"_412":45,"_45":1856},{"_412":1853,"_1091":1092,"_1098":1854,"_1099":1855},{"_412":45,"_45":1852},{"_412":1849,"_1850":1851,"_1098":293,"_1099":271},"terminal_chunk_citation","terminal_chunk_id","25aab4","\n\n**Testing**\n* ⚠️ `pytest -q` (fails because `requests_mock` is not installed in the environment)","repo_file_citation",90,168,"\n* Reworked PostgreSQL backup handling to align filenames with their real formats, stream both cluster-wide and single-database backups through gzip when compression is enabled, and keep custom-format dumps for uncompressed single-database backups.",244,296,"**Summary**\n* Updated `deploy_stack` to distinguish commit SHAs from branch names, allowing rollbacks to pinned SHAs while still resetting to the configured branch and ensuring fresh clones honor the stack’s branch metadata.","pr","pr_title","Fix stack rollback handling and PostgreSQL backup compression","pr_message","## Summary\n- allow `deploy_stack` to reset directly to SHA pins and honor the configured stack branch on first-time clones\n- repair PostgreSQL backup handling so compressed dumps stream through gzip and files are given extensions that match their actual format\n\n## Testing\n- not run (not requested)","output_diff",{"_91":1865,"_1868":1869,"_127":128,"_1870":-5,"_289":1871,"_1872":1873,"_1874":1875,"_1876":1877,"_1878":956,"_1879":1880,"_1881":-5},"pre_apply_patch","repo_id","/workspace/TailOpsMCP","preapply_patch_base_commit_sha","diff --git a/src/tools/database_tools.py b/src/tools/database_tools.py\nindex a2ad36e07e0445756edf5db5bcad96634f1bb164..8a7ecc1e12b898557ae5bcf7909e5db243875dda 100644\n--- a/src/tools/database_tools.py\n+++ b/src/tools/database_tools.py\n@@ -1,37 +1,38 @@\n \"\"\"Database backup and restore tools for PostgreSQL and MySQL.\n \n Provides automated backup, restore, and scheduling functionality for\n homelab database instances.\n \"\"\"\n \n from __future__ import annotations\n \n import asyncio\n import json\n import os\n import logging\n+import shlex\n from typing import Dict, Any, Optional, List\n from datetime import datetime\n from pathlib import Path\n import subprocess\n from asyncio import to_thread\n \n from fastmcp import FastMCP\n from src.utils.audit import AuditLogger\n from src.auth.middleware import secure_tool\n from src.server.utils import format_error\n from pydantic import BaseModel\n \n \n audit = AuditLogger()\n logger = logging.getLogger(__name__)\n \n \n class BackupConfig(BaseModel):\n \"\"\"Configuration for database backups.\"\"\"\n database_type: str # postgresql, mysql\n host: str = \"localhost\"\n port: Optional[int] = None\n database: Optional[str] = None # None means all databases\n username: str\n password: Optional[str] = None\n@@ -67,103 +68,126 @@ async def backup_postgresql(\n backup_path: str = \"/var/backups/databases\",\n compress: bool = True\n ) -> Dict[str, Any]:\n \"\"\"Backup PostgreSQL database(s).\n \n Args:\n host: Database host\n port: Database port\n database: Specific database to backup (None for all)\n username: Database username\n password: Database password (uses PGPASSWORD env var)\n backup_path: Path to store backups\n compress: Whether to compress the backup\n \n Returns:\n BackupResult with backup file path and metadata\n \"\"\"\n start_time = datetime.now()\n timestamp = start_time.strftime(\"%Y%m%d_%H%M%S\")\n \n # Ensure backup directory exists\n Path(backup_path).mkdir(parents=True, exist_ok=True)\n \n # Build backup filename\n db_name = database or \"all_databases\"\n- backup_file = f\"{backup_path}/postgresql_{db_name}_{timestamp}.sql\"\n- if compress:\n- backup_file += \".gz\"\n+ if database:\n+ if compress:\n+ backup_file = f\"{backup_path}/postgresql_{db_name}_{timestamp}.sql.gz\"\n+ else:\n+ backup_file = f\"{backup_path}/postgresql_{db_name}_{timestamp}.dump\"\n+ else:\n+ backup_file = f\"{backup_path}/postgresql_{db_name}_{timestamp}.sql\"\n+ if compress:\n+ backup_file += \".gz\"\n \n try:\n # Set up environment\n env = os.environ.copy()\n if password:\n env[\"PGPASSWORD\"] = password\n \n # Build command\n if database:\n # Backup single database\n- cmd = [\n+ base_cmd = [\n \"pg_dump\",\n \"-h\", host,\n \"-p\", str(port),\n \"-U\", username,\n- \"-F\", \"c\" if not compress else \"c\", # custom format\n- \"-f\", backup_file,\n- database\n ]\n+ if compress:\n+ base_cmd.append(database)\n+ cmd_str = \" \".join(shlex.quote(arg) for arg in base_cmd) + f\" | gzip > {shlex.quote(backup_file)}\"\n+ result = await to_thread(\n+ subprocess.run,\n+ cmd_str,\n+ shell=True,\n+ env=env,\n+ capture_output=True,\n+ text=True,\n+ check=True\n+ )\n+ else:\n+ base_cmd.extend([\"-F\", \"c\", \"-f\", backup_file, database])\n+ result = await to_thread(\n+ subprocess.run,\n+ base_cmd,\n+ env=env,\n+ capture_output=True,\n+ text=True,\n+ check=True\n+ )\n else:\n # Backup all databases\n- cmd = [\n+ base_cmd = [\n \"pg_dumpall\",\n \"-h\", host,\n \"-p\", str(port),\n \"-U\", username,\n- \"-f\", backup_file\n ]\n-\n- # Add compression if needed\n- if compress and not database: # pg_dumpall doesn't support -F c\n- cmd_str = \" \".join(cmd) + f\" | gzip > {backup_file}\"\n- result = await to_thread(\n- subprocess.run,\n- cmd_str,\n- shell=True,\n- env=env,\n- capture_output=True,\n- text=True,\n- check=True\n- )\n- else:\n- result = await to_thread(\n- subprocess.run,\n- cmd,\n- env=env,\n- capture_output=True,\n- text=True,\n- check=True\n- )\n+ if compress:\n+ cmd_str = \" \".join(shlex.quote(arg) for arg in base_cmd) + f\" | gzip > {shlex.quote(backup_file)}\"\n+ result = await to_thread(\n+ subprocess.run,\n+ cmd_str,\n+ shell=True,\n+ env=env,\n+ capture_output=True,\n+ text=True,\n+ check=True\n+ )\n+ else:\n+ base_cmd.extend([\"-f\", backup_file])\n+ result = await to_thread(\n+ subprocess.run,\n+ base_cmd,\n+ env=env,\n+ capture_output=True,\n+ text=True,\n+ check=True\n+ )\n \n # Get backup file size\n size_bytes = os.path.getsize(backup_file)\n duration = (datetime.now() - start_time).total_seconds()\n \n backup_result = BackupResult(\n success=True,\n backup_file=backup_file,\n size_bytes=size_bytes,\n duration_seconds=duration,\n timestamp=start_time\n )\n \n audit.log(\"backup_postgresql\", {\n \"host\": host,\n \"database\": database,\n \"backup_file\": backup_file\n }, {\n \"success\": True,\n \"size_bytes\": size_bytes,\n \"duration_seconds\": duration\n })\n \n return backup_result.dict()\n \ndiff --git a/src/tools/stack_tools.py b/src/tools/stack_tools.py\nindex 191adab6a520508b96388cb736467f47342b6775..9d9589c8f2edcdd5f3c767acb4bd01d4f1d661d0 100644\n--- a/src/tools/stack_tools.py\n+++ b/src/tools/stack_tools.py\n@@ -220,82 +220,97 @@ async def deploy_stack(req: DeployRequest) -> Dict[str, Any]:\n if repo_exists:\n planned.append(f\"Update repository in {stack_path}\")\n planned.append(f\"Fetch latest changes from {repo_url}\")\n else:\n planned.append(f\"Clone repository {repo_url} to {stack_path}\")\n \n if req.target_commit:\n planned.append(f\"Checkout commit/branch: {req.target_commit}\")\n \n if req.pull_images:\n planned.append(f\"Pull Docker images for {req.stack_name}\")\n \n planned.append(f\"Run docker-compose up -d for {req.stack_name}\")\n \n if req.dry_run:\n result = DeployResult(success=True, dry_run=True, planned_changes=planned, errors=[], deployed_commit=req.target_commit)\n audit.log(\"deploy_stack\", req.dict(), {\"success\": True, \"dry_run\": True})\n return result.dict()\n \n # Execute deployment\n try:\n # Ensure base directory exists\n os.makedirs(deploy_base, exist_ok=True)\n \n # Clone or update repository\n+ default_branch = stack.get(\"branch\", \"main\")\n+ target_ref = req.target_commit or default_branch\n+\n+ def looks_like_sha(ref: Optional[str]) -> bool:\n+ if not ref:\n+ return False\n+ ref = ref.strip()\n+ return 7 <= len(ref) <= 40 and all(c in \"0123456789abcdef\" for c in ref.lower())\n+\n+ if req.target_commit and looks_like_sha(req.target_commit):\n+ checkout_target = req.target_commit\n+ else:\n+ checkout_target = f\"origin/{target_ref}\"\n+\n if repo_exists:\n # Update existing repo\n git_fetch = await to_thread(\n subprocess.run,\n [\"git\", \"fetch\", \"--all\"],\n cwd=stack_path,\n capture_output=True,\n text=True,\n check=True\n )\n git_reset = await to_thread(\n subprocess.run,\n- [\"git\", \"reset\", \"--hard\", f\"origin/{req.target_commit or stack.get('branch', 'main')}\"],\n+ [\"git\", \"reset\", \"--hard\", checkout_target],\n cwd=stack_path,\n capture_output=True,\n text=True,\n check=True\n )\n else:\n # Clone new repo\n git_clone = await to_thread(\n subprocess.run,\n [\"git\", \"clone\", repo_url, stack_path],\n capture_output=True,\n text=True,\n check=True\n )\n \n- if req.target_commit:\n+ checkout_value = req.target_commit or stack.get(\"branch\")\n+ if checkout_value:\n git_checkout = await to_thread(\n subprocess.run,\n- [\"git\", \"checkout\", req.target_commit],\n+ [\"git\", \"checkout\", checkout_value],\n cwd=stack_path,\n capture_output=True,\n text=True,\n check=True\n )\n \n # Get current commit hash\n git_rev = await to_thread(\n subprocess.run,\n [\"git\", \"rev-parse\", \"HEAD\"],\n cwd=stack_path,\n capture_output=True,\n text=True,\n check=True\n )\n deployed_commit = git_rev.stdout.strip()\n \n # Pull images if requested\n if req.pull_images:\n compose_pull = await to_thread(\n subprocess.run,\n [\"docker\", \"compose\", \"pull\"],\n cwd=stack_path,\n capture_output=True,\n text=True,\n","external_storage_diff",{"_1882":1883,"_1884":-5},"files_modified",2,"lines_added",73,"lines_removed","commit_message","Fix stack deploy reset and pg backups","additional_parent_commit_shas","file_id","file_00000000724871f7a690d865d048bb21","ttl",{"_91":290,"_41":83,"_95":290,"_1887":1888,"_1889":1890,"_1891":1892,"_131":-5,"_118":1893},[82],"input_items",[1910,1911,1912,1913,1914,1915,1916,1917,1918,1919],"external_post_config",{"_1894":1895,"_230":1896,"_1897":271,"_241":-5,"_1868":224,"_1898":-5,"_1899":-5,"_1900":1901,"_1902":-5,"_1903":-5,"_1904":1905,"_1906":15,"_1907":57,"_1908":52,"_1909":15},"user_model_slug","slug",1763471096.458225,"installation_id",85883584,"mdlmarkham/TailOpsMCP","pr_number","review_trigger","comment_id","comment_type","issue","pr_write_guard_token","pending_pr_reaction_id","pending_comment_reaction_id",314901613,"comment_if_no_findings","comment_on_error","share_url","is_parallel_review",{"_91":1841,"_95":290,"_396":1939},{"_278":279,"_280":281,"_1936":285,"_1937":128,"_287":-5,"_91":1938},{"_91":1920,"_280":1935,"_1091":-5,"_1922":-5,"_1923":-5},{"_91":1920,"_280":1934,"_1091":-5,"_1922":-5,"_1923":-5},{"_91":1920,"_280":1932,"_1091":1520,"_1922":1926,"_1923":1933},{"_91":1920,"_280":1930,"_1091":1520,"_1922":1926,"_1923":1931},{"_91":1920,"_280":1928,"_1091":1092,"_1922":1926,"_1923":1929},{"_91":1920,"_280":1925,"_1091":1092,"_1922":1926,"_1923":1927},{"_91":1920,"_280":1924,"_1091":-5,"_1922":-5,"_1923":-5},{"_91":1920,"_280":1921,"_1091":-5,"_1922":-5,"_1923":-5},"pull_request_comment","@claude please resolve.","side","line","\n### 💡 Codex Review\n\nHere are some automated review suggestions for this pull request.\n \n\n

ℹ️ About Codex in GitHub

","**_{_{![P1 Badge](https://img.shields.io/badge/P1-orange?style=flat)}} Single-DB PostgreSQL backups mislabelled as gzip**\n\nWhen backing up a specific PostgreSQL database with `compress=True`, `backup_postgresql` appends `.sql.gz` to the filename but writes the dump via `pg_dump -F c -f ` without ever gzipping it. Later, `restore_postgresql` assumes every `.gz` file is a gzip stream (lines 392‑396) and blindly runs `gunzip -c backup_file | psql`, which fails with “not in gzip format” for every single‑database backup produced by the default settings. Consequently, those backups are unrecoverable. Either the backup routine must actually gzip the file, or the restore logic must treat `.gz` files generated by custom-format dumps differently.\n\nUseful? React with 👍 / 👎.","RIGHT",396,"**_{_{![P1 Badge](https://img.shields.io/badge/P1-orange?style=flat)}} Compressed pg_dumpall backups are empty/corrupt**\n\nFor full-cluster PostgreSQL backups with compression enabled (the default), the code builds `cmd = [\"pg_dumpall\", ..., \"-f\", backup_file]` and then runs `cmd_str = \" \".join(cmd) + f\" | gzip > {backup_file}\"` (lines 124‑128). Because `pg_dumpall` is already writing directly to `backup_file` via `-f`, nothing is sent through stdout to gzip, and gzip simultaneously truncates the same file before writing. The resulting `.sql.gz` file is empty or corrupted, so the backup cannot be restored. The command must either drop the `-f` flag and pipe stdout into gzip, or write the dump to a separate temp file before compressing.\n\nUseful? React with 👍 / 👎.",128,"**_{_{![P2 Badge](https://img.shields.io/badge/P2-yellow?style=flat)}} First-time clone ignores configured branch**\n\nIn the fresh‑clone path only `req.target_commit` triggers a checkout (lines 273‑276). If the stack metadata specifies a non‑default branch (e.g., `branch=\"production\"`) but `target_commit` is omitted, the clone stays on the repository’s default branch (`main`). Only subsequent deployments (when `.git` already exists) honor the configured branch. This means every initial deploy of a stack checks out the wrong code until the operator fixes it manually. The clone flow should checkout the stack’s configured branch when `target_commit` is not provided.\n\nUseful? React with 👍 / 👎.",276,"**_{_{![P1 Badge](https://img.shields.io/badge/P1-orange?style=flat)}} Reset to origin/ breaks SHA deployments**\n\nWhen `deploy_stack` receives a `target_commit` that is a git SHA (how rollback_stack works), it always executes `git reset --hard origin/{target}` (lines 255‑258). There is never a remote ref called `origin/`, so git exits with `fatal: ambiguous argument 'origin/'` and the deployment fails. As a result, neither rollback nor pinning a stack to an arbitrary commit can ever succeed. The reset needs to target the SHA (or a branch if the value is a branch name) instead of unconditionally prepending `origin/`.\n\nUseful? 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