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bash\nset -euo pipefail\n\nLOG_PREFIX=\"[workflows-codex-env]\"\nlog() { printf \"%s %s\\n\" \"$LOG_PREFIX\" \"$*\"; }\nwarn() { printf \"%s [warn] %s\\n\" \"$LOG_PREFIX\" \"$*\" >&2; }\ndie() { printf \"%s [error] %s\\n\" \"$LOG_PREFIX\" \"$*\" >&2; exit 1; }\n\n# -----------------------------\n# Locate Workflows repo root robustly (Codex scripts run from /tmp)\n# -----------------------------\nis_workflows_root() {\n local d=\"$1\"\n [[ -f \"${d}/pyproject.toml\" ]] || return 1\n [[ -f \"${d}/scripts/dev_check.sh\" ]] || return 1\n grep -q 'name = \"workflows\"' \"${d}/pyproject.toml\" 2>/dev/null || return 1\n return 0\n}\n\nfind_repo_root() {\n # 1) Prefer git root, but verify it's the Workflows repo.\n if command -v git >/dev/null 2>&1; then\n if git rev-parse --show-toplevel >/dev/null 2>&1; then\n local gr\n gr=\"$(git rev-parse --show-toplevel)\"\n if is_workflows_root \"${gr}\"; then\n echo \"${gr}\"\n return 0\n fi\n fi\n fi\n\n # 2) Walk upwards from current directory.\n local d=\"${PWD}\"\n while [[ \"${d}\" != \"/\" ]]; do\n if is_workflows_root \"${d}\"; then\n echo \"${d}\"\n return 0\n fi\n d=\"$(dirname \"${d}\")\"\n done\n\n # 3) Last resort: search common mount points.\n local bases=(\"${PWD}\" \"${GITHUB_WORKSPACE:-}\" \"/workspace\" \"/repo\" \"${HOME:-/home}\" \"/tmp\")\n local b\n for b in \"${bases[@]}\"; do\n [[ -n \"${b}\" && -d \"${b}\" ]] || continue\n while IFS= read -r py; do\n local cand\n cand=\"$(cd \"$(dirname \"${py}\")\" && pwd)\"\n if is_workflows_root \"${cand}\"; then\n echo \"${cand}\"\n return 0\n fi\n done < <(find \"${b}\" -maxdepth 5 -type f -name pyproject.toml 2>/dev/null | head -n 100)\n done\n\n return 1\n}\n\nREPO_ROOT=\"$(find_repo_root || true)\"\n[[ -n \"${REPO_ROOT}\" ]] || die \"Could not locate Workflows repo root (pyproject.toml + scripts/dev_check.sh + name='workflows').\"\n\ncd \"${REPO_ROOT}\"\nlog \"Repo root: ${REPO_ROOT}\"\n\n# Git sanity (best-effort)\nif command -v git >/dev/null 2>&1; then\n git config --global --add safe.directory \"${REPO_ROOT}\" >/dev/null 2>&1 || true\n git config --global user.name \"${GIT_AUTHOR_NAME:-Codex}\" >/dev/null 2>&1 || true\n git config --global user.email \"${GIT_AUTHOR_EMAIL:-codex@users.noreply.github.com}\" >/dev/null 2>&1 || true\nfi\n\n# -----------------------------\n# Python + venv (repo requires 3.11+)\n# -----------------------------\nPYTHON_BIN=\"${PYTHON_BIN:-python3}\"\ncommand -v \"${PYTHON_BIN}\" >/dev/null 2>&1 || die \"python3 not found on PATH.\"\n\n\"${PYTHON_BIN}\" - <<'PY'\nimport sys\nif sys.version_info < (3, 11):\n raise SystemExit(f\"Python 3.11+ required; found {sys.version.split()[0]}\")\nprint(\"Python OK:\", sys.version.split()[0])\nPY\n\nVENV_PATH=\"${REPO_ROOT}/.venv\"\nif [[ ! -d \"${VENV_PATH}\" ]]; then\n log \"Creating venv at ${VENV_PATH}\"\n \"${PYTHON_BIN}\" -m venv \"${VENV_PATH}\"\nfi\n# shellcheck disable=SC1091\nsource \"${VENV_PATH}/bin/activate\"\n\npython -m pip install -U pip setuptools wheel >/dev/null\n\n# -----------------------------\n# Optional lockfile sync (if present)\n# -----------------------------\npython -m pip install -U uv >/dev/null || true\n\nLOCK_FILE=\"${REPO_ROOT}/requirements.lock\"\nif [[ -f \"${LOCK_FILE}\" ]]; then\n log \"Found requirements.lock; syncing with uv (best-effort)\"\n uv pip sync \"${LOCK_FILE}\" || true\nelse\n log \"No requirements.lock found (expected for this repo).\"\nfi\n\n# -----------------------------\n# Install pyproject dependencies + dev extras WITHOUT installing the repo itself\n# (Avoids editable-build failure due to flat-layout multiple top-level packages.)\n# -----------------------------\nlog \"Installing deps + dev tools from pyproject.toml (no editable install)...\"\npython - <<'PY'\nfrom __future__ import annotations\nfrom pathlib import Path\nimport subprocess, sys\n\ntry:\n import tomllib # py3.11+\nexcept ModuleNotFoundError:\n subprocess.check_call([sys.executable, \"-m\", \"pip\", \"install\", \"tomli\"])\n import tomli as tomllib # type: ignore\n\ndata = tomllib.loads(Path(\"pyproject.toml\").read_text(encoding=\"utf-8\"))\nproj = data.get(\"project\", {}) or {}\n\ndeps = list(proj.get(\"dependencies\", []) or [])\ndev = list((proj.get(\"optional-dependencies\", {}) or {}).get(\"dev\", []) or [])\n\n# de-dup while preserving order\nseen = set()\npkgs = []\nfor p in deps + dev:\n if p not in seen:\n pkgs.append(p)\n seen.add(p)\n\nif pkgs:\n subprocess.check_call([sys.executable, \"-m\", \"pip\", \"install\", *pkgs])\nelse:\n print(\"[workflows-codex-env] [warn] No dependencies/dev extras found in pyproject.toml.\")\nPY\n\n# -----------------------------\n# Ensure required test packages (the ones your checker flags as missing)\n# -----------------------------\nlog \"Ensuring required test packages are installed...\"\npython - <<'PY'\nimport importlib, subprocess, sys\n\nrequired = {\n \"pytest\": \"pytest\",\n \"coverage\": \"coverage\",\n \"hypothesis\": \"hypothesis\",\n \"pandas\": \"pandas\",\n \"numpy\": \"numpy\",\n \"pydantic\": \"pydantic\",\n \"yaml\": \"PyYAML\",\n \"requests\": \"requests\",\n \"jsonschema\": \"jsonschema\",\n}\n\nmissing = []\nfor mod, pkg in required.items():\n try:\n importlib.import_module(mod)\n except Exception:\n missing.append(pkg)\n\nif missing:\n print(\"[workflows-codex-env] Installing missing:\", \" \".join(missing))\n subprocess.check_call([sys.executable, \"-m\", \"pip\", \"install\", *missing])\nelse:\n print(\"[workflows-codex-env] Required packages already present.\")\nPY\n\n# -----------------------------\n# Make local modules importable (agents/, templates/, etc.)\n# -----------------------------\nexport PYTHONPATH=\"${REPO_ROOT}${PYTHONPATH:+:${PYTHONPATH}}\"\n\n# Persist env for interactive shells (best-effort)\nMARKER=\"# >>> Workflows Codex env >>>\"\nif [[ -w \"${HOME}/.bashrc\" ]] && ! grep -qs \"${MARKER}\" \"${HOME}/.bashrc\"; then\n {\n echo \"\"\n echo \"${MARKER}\"\n echo \"export WORKFLOWS_REPO_ROOT=\\\"${REPO_ROOT}\\\"\"\n echo \"export VIRTUAL_ENV=\\\"${REPO_ROOT}/.venv\\\"\"\n echo \"export PATH=\\\"${REPO_ROOT}/.venv/bin:\\$PATH\\\"\"\n echo \"export PYTHONPATH=\\\"${REPO_ROOT}\\${PYTHONPATH:+:\\$PYTHONPATH}\\\"\"\n echo \"# <<< Workflows Codex env <<<\"\n } >> \"${HOME}/.bashrc\" || true\nfi\n\n# -----------------------------\n# Optional: run repo dependency checker (should be clean now; don't brick setup if it isn't)\n# -----------------------------\nif [[ -x \"${REPO_ROOT}/scripts/check_test_dependencies.sh\" ]]; then\n log \"Running scripts/check_test_dependencies.sh (non-fatal)\"\n bash \"${REPO_ROOT}/scripts/check_test_dependencies.sh\" || true\nfi\n\nlog \"Setup complete. Common next commands:\"\nlog \" ./scripts/dev_check.sh\"\nlog \" ./scripts/validate_fast.sh\"\n","mode","on","preset_allowlist","allowlist_domains","pypi.org, github.com, files.pythonhosted.org, deb.debian.org, security.ubuntu.com, raw.githubusercontent.com","allowlist_rules","denylist_domains","safe_methods_only","number",310,"https://github.com/stranske/Workflows/pull/310","state","closed","merged","mergeable","draft","title","fix: improve verifier follow-up issue format","body","\n\n\n\n## Automated Status Summary\n#### Scope\n- [ ] Scope section missing from source issue.\n\n#### Tasks\n- [ ] Tasks section missing from source issue.\n\n#### Acceptance criteria\n- [ ] Acceptance criteria section missing from source issue.\n\n**Head SHA:** 9334b8480527438ff41fcbcd5d69ec4567b85f7d\n**Latest Runs:** ❔ in progress — Gate\n**Required:** gate: ❔ in progress\n\n| Workflow / Job | Result | Logs |\n|----------------|--------|------|\n| Agents PR meta manager | ❔ in progress | [View run](https://github.com/stranske/Workflows/actions/runs/20590944838) |\n| CI Autofix Loop | ✅ success | [View run](https://github.com/stranske/Workflows/actions/runs/20590936789) |\n| Copilot code review | ❔ in progress | [View run](https://github.com/stranske/Workflows/actions/runs/20590937189) |\n| Gate | ❔ in progress | [View run](https://github.com/stranske/Workflows/actions/runs/20590936775) |\n| Health 40 Sweep | ✅ success | [View run](https://github.com/stranske/Workflows/actions/runs/20590936788) |\n| Health 44 Gate Branch Protection | ✅ success | [View run](https://github.com/stranske/Workflows/actions/runs/20590936778) |\n| Health 45 Agents Guard | ✅ success | [View run](https://github.com/stranske/Workflows/actions/runs/20590936794) |\n| Health 50 Security Scan | ❔ in progress | [View run](https://github.com/stranske/Workflows/actions/runs/20590936781) |\n| Maint 52 Validate Workflows | ✅ success | [View run](https://github.com/stranske/Workflows/actions/runs/20590936774) |\n| PR 11 - Minimal invariant CI | ✅ success | [View run](https://github.com/stranske/Workflows/actions/runs/20590936782) |\n| Selftest CI | ✅ success | [View run](https://github.com/stranske/Workflows/actions/runs/20590936780) |\n| Validate Sync Manifest | ✅ success | [View run](https://github.com/stranske/Workflows/actions/runs/20590936776) |\n","base","head","base_sha","61ebdc459a762079425e7aa1ad722981171952e3","head_sha","head_repo_id","head_repo_full_name","merge_commit_sha","46938e190df6e15ba3b0b108411b0a9b47c3021e","comments","diff","user",{"_266":267,"_159":267,"_315":-5,"_270":271,"_53":268},"commits",1,"changed_files","additions",13,"deletions",4,"email","events",[],[],"messages",[],{"_104":952,"_953":954,"_955":956,"_957":958,"_959":-5},{"_104":927,"_108":105,"_339":928},{"_104":324,"_325":326},"partial_repo_snapshot","files",[327,328],{"_329":592,"_331":-5,"_332":593,"_334":-5},{"_329":330,"_331":-5,"_332":333,"_334":-5},"path",".github/scripts/__tests__/verifier-issue-formatter.test.js","contents","line_range_contents",[335],"missing_reason",{"_336":309,"_337":338,"_339":340,"_341":70},"line_range_start","line_range_end",490,"content",[342,213,343,344,213,345,346,347,348,349,350,351,352,353,213,354,355,356,357,358,359,360,361,362,363,364,213,365,366,367,368,364,213,369,357,358,370,360,371,364,213,372,357,358,373,360,374,375,364,213,376,357,358,377,360,378,364,213,379,357,358,380,360,381,382,364,383,213,384,385,386,387,388,364,213,389,390,387,391,364,213,392,393,387,394,364,213,395,396,213,397,398,399,387,400,401,364,213,402,396,213,403,404,213,405,406,387,407,364,213,408,396,213,409,410,411,412,413,213,397,414,415,387,391,416,417,364,213,418,396,213,419,420,421,415,387,422,423,364,383,213,424,425,426,427,428,429,430,364,213,431,432,433,434,429,435,364,213,436,437,438,429,439,440,441,364,213,442,443,429,444,364,213,445,446,447,448,449,450,429,451,364,383,213,452,453,454,455,456,457,458,364,213,459,460,444,364,213,461,462,444,364,383,213,463,464,465,466,467,364,213,468,469,470,364,213,471,472,470,364,383,213,473,474,213,475,213,476,477,478,213,479,480,213,481,482,483,484,213,485,486,487,213,488,489,490,491,492,213,493,494,213,495,496,213,481,497,498,213,485,499,500,501,213,502,503,504,505,506,358,360,507,508,364,213,509,503,504,505,506,358,510,511,360,512,513,514,364,213,515,503,504,505,506,358,360,516,517,364,213,518,503,504,505,506,358,360,519,520,364,213,521,503,504,505,506,358,360,522,523,364,213,524,503,504,505,506,358,360,525,526,364,213,527,528,529,530,213,485,531,213,503,504,532,533,358,360,534,535,364,213,536,503,504,505,506,358,360,537,538,364,213,539,503,504,505,506,358,360,540,541,364,213,542,543,544,213,409,545,546,547,415,213,548,549,213,485,486,550,551,213,503,552,553,533,554,360,213,555,556,557,558,559,560,561,562,557,563,564,565,364,213,566,544,213,409,567,568,415,213,548,569,213,485,570,571,213,503,552,553,533,572,360,213,573,574,575,364,383,213,576,474,213,577,213,578,579,504,358,360,580,581,364,213,582,579,504,358,360,525,583,584,364,213,585,579,504,358,360,522,586,364,213,587,579,504,358,360,507,364,213,588,579,504,360,589,590,364,383,591],"contains_end_of_file","'use strict';","const { describe, it } = require('node:test');","const assert = require('node:assert/strict');","const {"," formatFollowUpIssue,"," formatSimpleFollowUpIssue,"," formatSourceSection,"," parseVerifierFindings,"," extractUncheckedItems,"," extractCheckedItems,"," buildChecklist,","} = require('../verifier_issue_formatter.js');","describe('verifier_issue_formatter', () => {"," describe('formatSourceSection', () => {"," it('includes PR link when provided', () => {"," const result = formatSourceSection({"," prNumber: 123,"," prUrl: 'https://github.com/owner/repo/pull/123',"," });"," assert.ok(result.includes('Original PR:'));"," assert.ok(result.includes('[#123]'));"," assert.ok(result.includes('https://github.com/owner/repo/pull/123'));"," });"," it('uses plain reference when URL not provided', () => {"," const result = formatSourceSection({ prNumber: 123 });"," assert.ok(result.includes('Original PR: #123'));"," assert.ok(!result.includes('[#123]'));"," it('includes parent issues', () => {"," issueNumbers: [100, 101],"," assert.ok(result.includes('Parent issues: #100, #101'));"," it('uses singular for single parent issue', () => {"," issueNumbers: [100],"," assert.ok(result.includes('Parent issue: #100'));"," assert.ok(!result.includes('Parent issues'));"," it('includes verdict', () => {"," verdict: 'fail',"," assert.ok(result.includes('Verifier verdict: FAIL'));"," it('includes workflow run link', () => {"," runUrl: 'https://github.com/owner/repo/actions/runs/123',"," assert.ok(result.includes('[workflow run]'));"," assert.ok(result.includes('https://github.com/owner/repo/actions/runs/123'));"," });"," describe('parseVerifierFindings', () => {"," it('extracts pass verdict', () => {"," const output = 'Verdict: PASS\\n\\nAll criteria met.';"," const findings = parseVerifierFindings(output);"," assert.equal(findings.verdict, 'pass');"," it('extracts fail verdict (case insensitive)', () => {"," const output = 'verdict: Fail\\n\\nSome issues found.';"," assert.equal(findings.verdict, 'fail');"," it('returns unknown for missing verdict', () => {"," const output = 'Some random text without verdict.';"," assert.equal(findings.verdict, 'unknown');"," it('extracts gaps from blocking section', () => {"," const output = `Verdict: FAIL","Blocking gaps:","- Missing test coverage","- API returns wrong status code`;"," assert.ok(findings.gaps.includes('Missing test coverage'));"," assert.ok(findings.gaps.includes('API returns wrong status code'));"," it('extracts summary after verdict', () => {","The implementation is incomplete.","Several edge cases are not handled.","- Gap 1","- Gap 2`;"," assert.ok(findings.summary.includes('implementation is incomplete'));"," it('parses structured Criteria Status section', () => {","## Criteria Status","- [x] Tests pass - VERIFIED (all 30 tests pass)","- [ ] Error handling works - NOT MET (missing retry logic)","- [x] Documentation updated - VERIFIED (README updated)","- [ ] Coverage above 80% - NOT MET (currently at 65%)","- Retry logic not implemented","`;"," assert.deepEqual(findings.unmetCriteria, ['Error handling works', 'Coverage above 80%']);"," assert.deepEqual(findings.verifiedCriteria, ['Tests pass', 'Documentation updated']);"," it('handles Criteria Status with bold header', () => {","**Criteria Status**","- [x] First criterion - VERIFIED","- [ ] Second criterion - NOT MET (reason here)"," assert.deepEqual(findings.unmetCriteria, ['Second criterion']);"," assert.deepEqual(findings.verifiedCriteria, ['First criterion']);"," describe('extractUncheckedItems', () => {"," it('extracts unchecked items', () => {"," const content = `- [ ] First task","- [x] Completed task","- [ ] Second task`;"," const items = extractUncheckedItems(content);"," assert.deepEqual(items, ['First task', 'Second task']);"," it('handles asterisk bullets', () => {"," const content = `* [ ] Task one","* [x] Done","* [ ] Task two`;"," assert.deepEqual(items, ['Task one', 'Task two']);"," it('handles indented items', () => {"," const content = `- [ ] Parent task"," - [ ] Sub-task`;"," assert.equal(items.length, 2);"," assert.ok(items.includes('Parent task'));"," assert.ok(items.includes('Sub-task'));"," it('returns empty array for no checkboxes', () => {"," const content = 'Just some text without checkboxes';"," assert.deepEqual(items, []);"," it('filters markdown headers and PR/Issue references', () => {"," const content = `- [ ] ## Related","- [ ] PR #296 - Follow up","- [ ] - PR #123 - Description","- [ ] Normal task","- [ ] Another task`;"," assert.deepEqual(items, ['Normal task', 'Another task']);"," describe('extractCheckedItems', () => {"," it('extracts checked items', () => {"," const content = `- [ ] Unchecked","- [x] First done","- [X] Second done`;"," const items = extractCheckedItems(content);"," assert.deepEqual(items, ['First done', 'Second done']);"," it('handles empty content', () => {"," const items = extractCheckedItems('');"," it('handles null content', () => {"," const items = extractCheckedItems(null);"," describe('buildChecklist', () => {"," it('builds unchecked checklist', () => {"," const items = ['Task one', 'Task two'];"," const result = buildChecklist(items);"," assert.equal(result, '- [ ] Task one\\n- [ ] Task two');"," it('returns empty string for empty array', () => {"," const result = buildChecklist([]);"," assert.equal(result, '');"," it('returns empty string for non-array', () => {"," const result = buildChecklist(null);"," describe('formatFollowUpIssue', () => {"," const verifierOutput = `Verdict: FAIL","The error handling is incomplete.","Blocking:","- Missing retry logic for rate limits","- No backoff delay implementation`;"," const prBody = `## Scope","Implement error handling.","## Tasks","- [x] Add error classifier","- [ ] Add retry logic","- [x] Add tests","## Acceptance Criteria","- [ ] Retry logic handles rate limits","- [ ] Tests cover all error paths`;"," const issue = {"," number: 100,"," title: 'Error handling',"," body: `## Why","We need better error handling.","## Non-Goals","- Changing existing behavior","## Scope","Error classification and recovery.","- [ ] Create error module","- [ ] Add retry wrapper","- [ ] Errors are classified","- [ ] Retries use exponential backoff`,"," };"," it('generates title with PR number', () => {"," const result = formatFollowUpIssue({"," verifierOutput,"," prBody,"," issues: [issue],"," assert.ok(result.title.includes('PR #123'));"," assert.ok(result.title.includes('Follow-up'));"," it('includes source section with links', () => {"," prUrl: 'https://github.com/test/repo/pull/123',"," runUrl: 'https://github.com/test/repo/actions/runs/456',"," assert.ok(result.body.includes('## Source'));"," assert.ok(result.body.includes('#123'));"," assert.ok(result.body.includes('#100'));"," it('preserves Why section from parent issue', () => {"," assert.ok(result.body.includes('## Why'));"," assert.ok(result.body.includes('better error handling'));"," it('preserves Non-Goals section', () => {"," assert.ok(result.body.includes('## Non-Goals'));"," assert.ok(result.body.includes('Changing existing behavior'));"," it('includes unmet acceptance criteria', () => {"," assert.ok(result.body.includes('## Acceptance Criteria'));"," assert.ok(result.body.includes('Retry logic handles rate limits'));"," it('copies incomplete tasks', () => {"," assert.ok(result.body.includes('## Tasks'));"," assert.ok(result.body.includes('Add retry logic'));"," it('generates tasks from gaps when all tasks complete', () => {"," const allTasksComplete = `## Tasks","- [x] Task one","- [x] Task two","- [ ] Criterion not met`;"," prBody: allTasksComplete,"," issues: [],"," // Should generate tasks from verifier gaps"," assert.ok(result.newTasks.length > 0);"," it('includes implementation notes with summary', () => {"," assert.ok(result.body.includes('## Implementation Notes'));"," assert.ok(result.body.includes('error handling is incomplete'));"," it('returns parsed findings', () => {"," assert.equal(result.findings.verdict, 'fail');"," assert.ok(result.findings.gaps.length > 0);"," it('uses verifier unmet criteria to filter acceptance criteria', () => {"," // Verifier explicitly says which criteria are not met"," const structuredVerifierOutput = `Verdict: FAIL","- [x] Retry logic handles rate limits - VERIFIED (code exists)","- [ ] Tests cover all error paths - NOT MET (missing coverage)","- [x] Error messages are helpful - VERIFIED (messages include guidance)"," const prBodyWithCriteria = `## Tasks","- [x] All tasks done","- [ ] Tests cover all error paths","- [ ] Error messages are helpful`;"," verifierOutput: structuredVerifierOutput,"," prBody: prBodyWithCriteria,"," prNumber: 200,"," // Should only include the criterion that was NOT MET in the refined list"," assert.deepEqual(result.unmetCriteria, ['Tests cover all error paths']);"," "," // The Acceptance Criteria section should only have the unmet criterion"," const acceptanceSection = result.body.split('## Acceptance Criteria')[1].split('## ')[0];"," assert.ok(acceptanceSection.includes('Tests cover all error paths'));"," assert.ok(!acceptanceSection.includes('- [ ] Retry logic handles rate limits'));"," assert.ok(!acceptanceSection.includes('- [ ] Error messages are helpful'));"," // Verified criteria should appear in Implementation Notes, not Acceptance Criteria"," const notesSection = result.body.split('## Implementation Notes')[1] || '';"," assert.ok(notesSection.includes('Retry logic handles rate limits'));"," it('includes verified criteria in implementation notes', () => {","- [x] First criterion - VERIFIED (evidence)","- [ ] Second criterion - NOT MET (missing)","- [x] Done","- [ ] First criterion","- [ ] Second criterion`;"," prNumber: 201,"," // Implementation notes should mention what was verified"," assert.ok(result.body.includes('Verifier confirmed these criteria were met'));"," assert.ok(result.body.includes('✓ First criterion'));"," describe('formatSimpleFollowUpIssue', () => {","Something went wrong.`;"," it('includes verifier output in code block', () => {"," const result = formatSimpleFollowUpIssue({"," assert.ok(result.body.includes('```'));"," assert.ok(result.body.includes('Something went wrong'));"," it('includes basic tasks', () => {"," assert.ok(result.body.includes('Review verifier output'));"," assert.ok(result.body.includes('Address identified gaps'));"," it('includes acceptance criteria for re-verification', () => {"," assert.ok(result.body.includes('Verifier passes'));"," it('generates appropriate title', () => {"," it('handles missing PR number', () => {"," assert.ok(result.title.includes('Verifier failure'));"," assert.ok(!result.title.includes('PR #'));","});",".github/scripts/verifier_issue_formatter.js",[594],{"_336":309,"_337":595,"_339":596,"_341":70},534,[342,213,345,597,598,213,599,600,601,602,603,604,605,606,607,608,609,610,213,611,612,613,614,213,615,616,213,617,618,619,620,213,599,621,602,622,623,624,625,626,627,628,606,629,630,213,631,632,633,614,213,634,635,636,614,213,637,638,614,213,639,640,614,213,641,620,213,599,642,643,644,645,646,602,647,648,606,649,650,651,652,653,654,655,656,657,213,658,659,660,661,614,213,662,663,664,665,213,666,667,213,668,669,670,671,672,213,673,674,675,672,213,676,677,678,679,680,557,681,682,683,684,685,672,614,213,686,687,688,213,689,690,213,691,692,693,694,685,213,695,696,697,698,699,700,685,213,701,702,703,685,672,614,213,704,705,706,707,667,708,709,671,672,710,711,614,712,213,713,620,213,599,714,602,715,716,606,717,718,719,213,666,720,721,722,723,724,725,694,685,726,727,694,685,728,672,614,213,729,620,213,599,730,602,715,731,606,732,718,719,213,666,733,734,722,735,672,614,213,729,620,213,599,736,602,737,738,606,739,740,741,614,742,620,213,599,743,602,744,745,746,747,748,602,622,749,750,751,752,753,754,755,606,756,757,758,759,760,761,762,763,764,765,213,766,767,768,769,770,213,771,772,773,774,775,657,213,776,777,778,779,780,781,614,213,782,783,784,785,786,787,788,789,790,672,614,791,792,793,788,789,672,614,213,794,795,784,785,796,797,798,790,672,614,799,800,797,798,672,614,213,801,802,803,804,805,213,806,807,808,809,810,811,812,813,814,815,816,817,818,819,820,821,364,822,823,824,614,213,825,826,827,828,829,830,831,832,833,834,835,836,837,838,839,840,841,842,843,672,614,213,844,845,846,847,614,848,849,850,851,852,672,614,853,849,854,855,856,672,614,631,849,857,614,213,858,859,213,860,861,862,863,864,865,866,867,213,868,869,870,614,213,871,872,873,822,874,614,213,875,876,877,614,213,878,879,880,881,882,883,822,884,614,213,885,886,887,888,889,890,822,891,614,213,892,893,894,614,213,895,896,897,898,213,899,900,901,902,903,904,657,620,213,599,905,906,602,622,749,752,753,907,754,755,606,908,757,760,761,909,762,763,764,213,910,213,860,911,862,863,864,865,866,867,213,912,913,912,914,915,914,213,912,916,912,917,918,919,213,912,920,912,921,213,896,922,923,213,899,900,924,902,657,620,213,925,346,347,348,349,350,351,352,926]," parseScopeTasksAcceptanceSections,","} = require('./issue_scope_parser.js');","/**"," * Simple similarity score between two strings (0-1)."," * Uses Jaccard similarity on word sets for fuzzy matching."," *"," * @param {string} a - First string"," * @param {string} b - Second string"," * @returns {number} Similarity score between 0 and 1"," */","function similarityScore(a, b) {"," const normalize = (s) => String(s || '').toLowerCase().replace(/[^\\w\\s]/g, '').trim();"," const normalizedA = normalize(a);"," const normalizedB = normalize(b);"," // If either side is empty or whitespace-only, treat as no similarity for filtering purposes."," if (!normalizedA || !normalizedB) {"," return 0;"," }"," const wordsA = new Set(normalizedA.split(/\\s+/).filter(Boolean));"," const wordsB = new Set(normalizedB.split(/\\s+/).filter(Boolean));"," const intersection = new Set([...wordsA].filter((w) => wordsB.has(w)));"," const union = new Set([...wordsA, ...wordsB]);"," return intersection.size / union.size;","}"," * Formats a \"Source\" section with references to the original PR and issue."," * @param {Object} options"," * @param {number} [options.prNumber] - Original PR number"," * @param {string} [options.prUrl] - URL to the PR"," * @param {number[]} [options.issueNumbers] - Parent issue numbers"," * @param {string} [options.verdict] - Verifier verdict (pass/fail)"," * @param {string} [options.runUrl] - URL to the verifier workflow run"," * @returns {string} Formatted source section","function formatSourceSection({ prNumber, prUrl, issueNumbers, verdict, runUrl }) {"," const lines = ['## Source', ''];"," if (prNumber) {"," const prLink = prUrl ? `[#${prNumber}](${prUrl})` : `#${prNumber}`;"," lines.push(`- Original PR: ${prLink}`);"," if (Array.isArray(issueNumbers) && issueNumbers.length > 0) {"," const issueLinks = issueNumbers.map((n) => `#${n}`).join(', ');"," lines.push(`- Parent issue${issueNumbers.length > 1 ? 's' : ''}: ${issueLinks}`);"," if (verdict) {"," lines.push(`- Verifier verdict: ${verdict.toUpperCase()}`);"," if (runUrl) {"," lines.push(`- Verifier run: [workflow run](${runUrl})`);"," return lines.join('\\n');"," * Parse verifier output to extract unmet acceptance criteria and task gaps."," * "," * Supports two formats:"," * 1. Structured \"Criteria Status\" section with checkboxes"," * 2. Legacy format with \"blocking gaps\" bullet points"," * @param {string} verifierOutput - Raw output from the verifier (codex-output.md)"," * @returns {Object} Parsed findings","function parseVerifierFindings(verifierOutput) {"," const output = String(verifierOutput || '');"," const findings = {"," verdict: 'unknown',"," unmetCriteria: [],"," verifiedCriteria: [],"," gaps: [],"," summary: '',"," };"," // Extract verdict"," const verdictMatch = output.match(/verdict:\\s*(pass|fail)/i);"," if (verdictMatch) {"," findings.verdict = verdictMatch[1].toLowerCase();"," // Parse structured \"Criteria Status\" section if present"," // Look for checkboxes with status indicators like \"- [ ] criterion - NOT MET\" or \"- [x] criterion - VERIFIED\""," const lines = output.split('\\n');"," let inCriteriaSection = false;"," for (const line of lines) {"," const trimmed = line.trim();"," // Detect \"Criteria Status\" section header"," if (/^#+\\s*criteria\\s*status/i.test(trimmed) || /^\\*\\*criteria\\s*status\\*\\*/i.test(trimmed)) {"," inCriteriaSection = true;"," continue;"," }"," // End section on next heading"," if (inCriteriaSection && /^#+\\s/.test(trimmed) && !/criteria\\s*status/i.test(trimmed)) {"," inCriteriaSection = false;"," // Parse criterion lines in the criteria section"," if (inCriteriaSection) {"," // Match \"- [ ] criterion text - NOT MET (reason)\" or \"- [x] criterion text - VERIFIED (evidence)\""," const unmetMatch = trimmed.match(/^[-*]\\s+\\[\\s\\]\\s+(.+?)\\s*-\\s*NOT\\s*MET/i);"," const verifiedMatch = trimmed.match(/^[-*]\\s+\\[[xX]\\]\\s+(.+?)\\s*-\\s*VERIFIED/i);"," if (unmetMatch) {"," findings.unmetCriteria.push(unmetMatch[1].trim());"," } else if (verifiedMatch) {"," findings.verifiedCriteria.push(verifiedMatch[1].trim());"," }"," // Fall back to legacy gap detection if no structured criteria found"," if (findings.unmetCriteria.length === 0) {"," let inGapsSection = false;"," for (const line of lines) {"," const trimmed = line.trim();"," // Detect sections that indicate gaps"," if (/^(blocking|gap|missing|fail|unmet)/i.test(trimmed)) {"," inGapsSection = true;"," continue;"," // Capture bullet points describing issues"," if (inGapsSection && /^[-*•]/.test(trimmed)) {"," const content = trimmed.replace(/^[-*•]\\s*/, '').trim();"," if (content) {"," findings.gaps.push(content);"," }"," // Reset section tracking on blank lines or new headings"," if (!trimmed || /^#/.test(trimmed)) {"," inGapsSection = false;"," // Build summary from the first paragraph after verdict"," const afterVerdict = output.split(/verdict:\\s*(pass|fail)/i)[2] || '';"," const summaryLines = [];"," for (const line of afterVerdict.split('\\n')) {"," if (!trimmed) {"," if (summaryLines.length > 0) break;"," if (/^[-*•#]/.test(trimmed)) break;"," summaryLines.push(trimmed);"," findings.summary = summaryLines.join(' ').trim();"," return findings;"," * Extract unchecked items from a checkbox section."," * @param {string} content - Section content with checkboxes"," * @returns {string[]} Array of unchecked item texts","function extractUncheckedItems(content) {"," const items = [];"," const lines = String(content || '').split('\\n');"," // Match unchecked boxes: - [ ] or * [ ]"," const match = line.match(/^\\s*[-*]\\s+\\[\\s\\]\\s+(.+)$/);"," if (match) {"," const text = match[1].trim();"," // Skip markdown section headers that were incorrectly captured as criteria"," if (text.startsWith('#')) {"," // Skip items that look like markdown links to sections (e.g., \"- PR #123\")"," if (/^[-–]?\\s*(PR|Issue)\\s*#\\d+/i.test(text)) {"," items.push(text);"," return items;"," * Extract checked items from a checkbox section."," * @returns {string[]} Array of checked item texts","function extractCheckedItems(content) {"," // Match checked boxes: - [x] or - [X] or * [x]"," const match = line.match(/^\\s*[-*]\\s+\\[[xX]\\]\\s+(.+)$/);"," items.push(match[1].trim());"," * Build a checklist from items, all unchecked."," * @param {string[]} items - List of task/criteria descriptions"," * @returns {string} Formatted checklist","function buildChecklist(items) {"," if (!Array.isArray(items) || items.length === 0) {"," return '';"," return items.map((item) => `- [ ] ${item}`).join('\\n');"," * Format a follow-up issue body based on verifier failure."," * This function:"," * 1. Copies unmet acceptance criteria from the original issue/PR"," * 2. Generates new tasks based on verifier findings"," * 3. Preserves context (Why, Scope, Non-Goals) from the original"," * 4. Adds implementation notes with verifier details"," * @param {string} options.verifierOutput - Raw verifier output"," * @param {string} [options.prBody] - Original PR body"," * @param {Object[]} [options.issues] - Array of linked issues with {number, title, body}"," * @param {number} [options.prNumber] - PR number"," * @param {string} [options.prUrl] - PR URL"," * @param {string} [options.runUrl] - Verifier workflow run URL"," * @returns {Object} { title: string, body: string }","function formatFollowUpIssue({"," verifierOutput,"," prBody,"," issues = [],"," prNumber,"," prUrl,"," runUrl,","}) {"," const findings = parseVerifierFindings(verifierOutput);"," const issueNumbers = issues.map((i) => i.number).filter(Boolean);"," // Parse sections from PR and all linked issues"," const prSections = parseScopeTasksAcceptanceSections(prBody || '');"," const issueSectionsList = issues.map((issue) =>"," parseScopeTasksAcceptanceSections(issue.body || '')"," );"," // Merge sections, preferring the first non-empty value found"," const merged = {"," scope: '',"," tasks: '',"," acceptance: '',"," // Check PR first, then issues in order"," const allSources = [prSections, ...issueSectionsList];"," for (const source of allSources) {"," if (!merged.scope && source.scope) merged.scope = source.scope;"," if (!merged.tasks && source.tasks) merged.tasks = source.tasks;"," if (!merged.acceptance && source.acceptance) merged.acceptance = source.acceptance;"," // Extract Why/Goals section (look for common patterns)"," let why = '';"," for (const issue of issues) {"," const body = issue.body || '';"," // Look for ## Why, ## Goals, ## Summary sections"," const whyMatch = body.match(/##\\s*(?:Why|Goals?|Summary|Motivation)\\s*\\n([\\s\\S]*?)(?=\\n##|\\n---|\\n\\n\\n|$)/i);"," if (whyMatch) {"," why = whyMatch[1].trim();"," break;"," // Also check PR body"," if (!why && prBody) {"," const whyMatch = prBody.match(/##\\s*(?:Why|Goals?|Summary|Motivation)\\s*\\n([\\s\\S]*?)(?=\\n##|\\n---|\\n\\n\\n|$)/i);"," // Extract Non-Goals section"," let nonGoals = '';"," const ngMatch = body.match(/##\\s*(?:Non-Goals?|Out of Scope|Constraints)\\s*\\n([\\s\\S]*?)(?=\\n##|\\n---|\\n\\n\\n|$)/i);"," if (ngMatch) {"," nonGoals = ngMatch[1].trim();"," if (!nonGoals && prBody) {"," const ngMatch = prBody.match(/##\\s*(?:Non-Goals?|Out of Scope|Constraints)\\s*\\n([\\s\\S]*?)(?=\\n##|\\n---|\\n\\n\\n|$)/i);"," // Determine unmet acceptance criteria"," // Priority: 1) Verifier's explicit unmet criteria, 2) Cross-reference with verified, 3) Fall back to unchecked items"," const uncheckedAcceptance = extractUncheckedItems(merged.acceptance);"," const completedTasks = extractCheckedItems(merged.tasks);"," const incompleteTasks = extractUncheckedItems(merged.tasks);"," // Use verifier's findings to refine the unmet criteria list"," let refinedUnmetCriteria = [];"," "," if (findings.unmetCriteria.length > 0) {"," // Best case: Verifier explicitly identified which criteria weren't met"," refinedUnmetCriteria = findings.unmetCriteria;"," } else if (findings.verifiedCriteria.length > 0) {"," // Verifier confirmed some criteria - filter out verified ones from unchecked list"," const verifiedLower = findings.verifiedCriteria.map(c => c.toLowerCase().trim());"," refinedUnmetCriteria = uncheckedAcceptance.filter(criterion => {"," const criterionLower = criterion.toLowerCase().trim();"," // Keep criterion if it wasn't verified (fuzzy match to handle minor text differences)"," return !verifiedLower.some(verified => "," verified.includes(criterionLower) || criterionLower.includes(verified) ||"," similarityScore(verified, criterionLower) > 0.9"," );"," } else {"," // Fall back to all unchecked items from the original issue"," refinedUnmetCriteria = uncheckedAcceptance;"," // Build new task list based on scenario:"," // 1. If there are incomplete tasks, copy them"," // 2. If all tasks are complete but acceptance criteria aren't met,"," // generate new tasks from the gaps"," let newTasks = [];"," if (incompleteTasks.length > 0) {"," // Scenario 1: Copy incomplete tasks"," newTasks = incompleteTasks;"," } else if (completedTasks.length > 0 && refinedUnmetCriteria.length > 0) {"," // Scenario 2: All tasks done but criteria not met - need new tasks"," // Generate tasks from verifier findings or acceptance criteria"," if (findings.gaps.length > 0) {"," newTasks = findings.gaps.map((gap) => `${gap}`);"," } else if (findings.unmetCriteria.length > 0) {"," // Use verifier's specific unmet criteria (no prefix - it's clear these need work)"," newTasks = findings.unmetCriteria;"," } else {"," // Fall back to creating tasks from unmet acceptance criteria"," newTasks = refinedUnmetCriteria;"," // Build implementation notes"," const notesLines = [];"," if (findings.summary) {"," notesLines.push(findings.summary);"," if (findings.verifiedCriteria.length > 0) {"," notesLines.push('');"," notesLines.push('Verifier confirmed these criteria were met:');"," for (const criterion of findings.verifiedCriteria) {"," notesLines.push(`- ✓ ${criterion}`);"," if (findings.gaps.length > 0 && incompleteTasks.length === 0) {"," notesLines.push('Verifier identified the following gaps:');"," for (const gap of findings.gaps) {"," notesLines.push(`- ${gap}`);"," notesLines.push(`Original implementation in PR #${prNumber}.`);"," // Assemble the issue body"," const sections = [];"," // Source section"," sections.push(formatSourceSection({"," prNumber,"," prUrl,"," issueNumbers,"," verdict: findings.verdict,"," runUrl,"," }));"," // Why section (if available)"," if (why) {"," sections.push(['## Why', '', ``, why].join('\\n'));"," // Scope section"," if (merged.scope) {"," sections.push(['## Scope', '', ``, `Address unmet acceptance criteria from PR #${prNumber || 'N/A'}.`, '', 'Original scope:', merged.scope].join('\\n'));"," sections.push(['## Scope', '', `Address unmet acceptance criteria from PR #${prNumber || 'N/A'}.`].join('\\n'));"," // Non-Goals section (if available)"," if (nonGoals) {"," sections.push(['## Non-Goals', '', ``, nonGoals].join('\\n'));"," // Tasks section"," if (newTasks.length > 0) {"," const taskHeader = incompleteTasks.length > 0"," ? ''"," : '';"," sections.push(['## Tasks', '', taskHeader, buildChecklist(newTasks)].join('\\n'));"," sections.push(['## Tasks', '', '', '- [ ] Review verifier output and determine necessary tasks'].join('\\n'));"," // Acceptance Criteria section - use refined list from verifier findings"," if (refinedUnmetCriteria.length > 0) {"," const criteriaComment = findings.unmetCriteria.length > 0 || findings.verifiedCriteria.length > 0"," ? ''"," : '';"," sections.push(['## Acceptance Criteria', '', criteriaComment, buildChecklist(refinedUnmetCriteria)].join('\\n'));"," sections.push(['## Acceptance Criteria', '', '', '- [ ] All original acceptance criteria satisfied'].join('\\n'));"," // Implementation Notes section"," if (notesLines.length > 0) {"," sections.push(['## Implementation Notes', '', notesLines.join('\\n')].join('\\n'));"," // Build title"," const title = prNumber"," ? `[Follow-up] Unmet criteria from PR #${prNumber}`"," : '[Follow-up] Verifier failure - unmet acceptance criteria';"," return {"," title,"," body: sections.join('\\n\\n'),"," findings,"," unmetCriteria: refinedUnmetCriteria,"," newTasks,"," * Generate a simple follow-up issue when detailed parsing isn't needed."," * Used as a fallback when the source PR/issues don't have parseable sections."," * @param {number[]} [options.issueNumbers] - Linked issue numbers","function formatSimpleFollowUpIssue({"," issueNumbers = [],"," const lines = [];"," lines.push(formatSourceSection({"," lines.push('');"," lines.push('## Verifier Output');"," lines.push('```');"," lines.push(verifierOutput.trim());"," lines.push('## Tasks');"," lines.push('- [ ] Review verifier output above');"," lines.push('- [ ] Address identified gaps');"," lines.push('- [ ] Re-run verifier after fixes');"," lines.push('## Acceptance Criteria');"," lines.push('- [ ] Verifier passes on the follow-up PR');"," ? `Verifier failure for PR #${prNumber}`"," : 'Verifier failure on merged commit';"," body: lines.join('\\n'),","module.exports = {","};","message",[929,930,931,932,933,934,935,936],{"_937":57,"_57":951},{"_937":943,"_329":592,"_336":945,"_337":950},{"_937":57,"_57":949},{"_937":943,"_329":592,"_336":947,"_337":948},{"_937":57,"_57":946},{"_937":943,"_329":330,"_336":944,"_337":945},{"_937":57,"_57":942},{"_937":938,"_939":940,"_336":309,"_337":941},"content_type","terminal_chunk_citation","terminal_chunk_id","fc6db9",37,"\n\n**Testing**\n* ✅ `node --test .github/scripts/__tests__/verifier-issue-formatter.test.js` ","repo_file_citation",142,182,"\n* Added test coverage to ensure markdown headers and PR/Issue references are filtered while normal tasks remain captured. ",350,369,"\n* Removed the redundant “Address:” prefix when generating tasks from gap findings to align formatting with other task sources. ",195,"**Summary**\n* Simplified unchecked-item filtering to skip markdown headers and optional-dash PR/Issue references before adding tasks. ","pr","pr_title","Improve verifier issue formatting consistency","pr_message","## Summary\n- align generated gap tasks with other items by dropping the redundant \"Address:\" prefix\n- broaden filtering of unchecked items to omit markdown headers and PR/Issue references\n- add test coverage for the new unchecked-item filtering scenarios\n\n## Testing\n- node --test .github/scripts/__tests__/verifier-issue-formatter.test.js","output_diff",{"_104":957,"_960":961,"_139":140,"_962":-5,"_305":963,"_964":965,"_966":967,"_968":312,"_969":970,"_971":954,"_972":-5},"pre_apply_patch","repo_id","/workspace/Workflows","preapply_patch_base_commit_sha","diff --git a/.github/scripts/__tests__/verifier-issue-formatter.test.js b/.github/scripts/__tests__/verifier-issue-formatter.test.js\nindex 9a8bb37cbfa31991cecde495af2256fe479c63c7..38c64b7665469b06ceabfd82394e4e54bafdcc9c 100644\n--- a/.github/scripts/__tests__/verifier-issue-formatter.test.js\n+++ b/.github/scripts/__tests__/verifier-issue-formatter.test.js\n@@ -148,50 +148,60 @@ Blocking gaps:\n assert.deepEqual(items, ['First task', 'Second task']);\n });\n \n it('handles asterisk bullets', () => {\n const content = `* [ ] Task one\n * [x] Done\n * [ ] Task two`;\n const items = extractUncheckedItems(content);\n assert.deepEqual(items, ['Task one', 'Task two']);\n });\n \n it('handles indented items', () => {\n const content = `- [ ] Parent task\n - [ ] Sub-task`;\n const items = extractUncheckedItems(content);\n assert.equal(items.length, 2);\n assert.ok(items.includes('Parent task'));\n assert.ok(items.includes('Sub-task'));\n });\n \n it('returns empty array for no checkboxes', () => {\n const content = 'Just some text without checkboxes';\n const items = extractUncheckedItems(content);\n assert.deepEqual(items, []);\n });\n+\n+ it('filters markdown headers and PR/Issue references', () => {\n+ const content = `- [ ] ## Related\n+- [ ] PR #296 - Follow up\n+- [ ] - PR #123 - Description\n+- [ ] Normal task\n+- [ ] Another task`;\n+ const items = extractUncheckedItems(content);\n+ assert.deepEqual(items, ['Normal task', 'Another task']);\n+ });\n });\n \n describe('extractCheckedItems', () => {\n it('extracts checked items', () => {\n const content = `- [ ] Unchecked\n - [x] First done\n - [X] Second done`;\n const items = extractCheckedItems(content);\n assert.deepEqual(items, ['First done', 'Second done']);\n });\n \n it('handles empty content', () => {\n const items = extractCheckedItems('');\n assert.deepEqual(items, []);\n });\n \n it('handles null content', () => {\n const items = extractCheckedItems(null);\n assert.deepEqual(items, []);\n });\n });\n \n describe('buildChecklist', () => {\n it('builds unchecked checklist', () => {\n const items = ['Task one', 'Task two'];\ndiff --git a/.github/scripts/verifier_issue_formatter.js b/.github/scripts/verifier_issue_formatter.js\nindex 0864923714d9cadd62b6f4e0a508ccfde079e6f2..adebea6075a4dafe99234a27e08cf886646ef423 100644\n--- a/.github/scripts/verifier_issue_formatter.js\n+++ b/.github/scripts/verifier_issue_formatter.js\n@@ -163,55 +163,55 @@ function parseVerifierFindings(verifierOutput) {\n }\n if (/^[-*•#]/.test(trimmed)) break;\n summaryLines.push(trimmed);\n }\n findings.summary = summaryLines.join(' ').trim();\n \n return findings;\n }\n \n /**\n * Extract unchecked items from a checkbox section.\n *\n * @param {string} content - Section content with checkboxes\n * @returns {string[]} Array of unchecked item texts\n */\n function extractUncheckedItems(content) {\n const items = [];\n const lines = String(content || '').split('\\n');\n \n for (const line of lines) {\n // Match unchecked boxes: - [ ] or * [ ]\n const match = line.match(/^\\s*[-*]\\s+\\[\\s\\]\\s+(.+)$/);\n if (match) {\n const text = match[1].trim();\n // Skip markdown section headers that were incorrectly captured as criteria\n- if (text.startsWith('#') || text.startsWith('##')) {\n+ if (text.startsWith('#')) {\n continue;\n }\n // Skip items that look like markdown links to sections (e.g., \"- PR #123\")\n- if (/^[-–]\\s*(PR|Issue)\\s*#\\d+/i.test(text)) {\n+ if (/^[-–]?\\s*(PR|Issue)\\s*#\\d+/i.test(text)) {\n continue;\n }\n items.push(text);\n }\n }\n \n return items;\n }\n \n /**\n * Extract checked items from a checkbox section.\n *\n * @param {string} content - Section content with checkboxes\n * @returns {string[]} Array of checked item texts\n */\n function extractCheckedItems(content) {\n const items = [];\n const lines = String(content || '').split('\\n');\n \n for (const line of lines) {\n // Match checked boxes: - [x] or - [X] or * [x]\n const match = line.match(/^\\s*[-*]\\s+\\[[xX]\\]\\s+(.+)$/);\n if (match) {\n items.push(match[1].trim());\n }\n@@ -337,51 +337,51 @@ function formatFollowUpIssue({\n refinedUnmetCriteria = uncheckedAcceptance.filter(criterion => {\n const criterionLower = criterion.toLowerCase().trim();\n // Keep criterion if it wasn't verified (fuzzy match to handle minor text differences)\n return !verifiedLower.some(verified => \n verified.includes(criterionLower) || criterionLower.includes(verified) ||\n similarityScore(verified, criterionLower) > 0.9\n );\n });\n } else {\n // Fall back to all unchecked items from the original issue\n refinedUnmetCriteria = uncheckedAcceptance;\n }\n \n // Build new task list based on scenario:\n // 1. If there are incomplete tasks, copy them\n // 2. If all tasks are complete but acceptance criteria aren't met,\n // generate new tasks from the gaps\n let newTasks = [];\n if (incompleteTasks.length > 0) {\n // Scenario 1: Copy incomplete tasks\n newTasks = incompleteTasks;\n } else if (completedTasks.length > 0 && refinedUnmetCriteria.length > 0) {\n // Scenario 2: All tasks done but criteria not met - need new tasks\n // Generate tasks from verifier findings or acceptance criteria\n if (findings.gaps.length > 0) {\n- newTasks = findings.gaps.map((gap) => `Address: ${gap}`);\n+ newTasks = findings.gaps.map((gap) => `${gap}`);\n } else if (findings.unmetCriteria.length > 0) {\n // Use verifier's specific unmet criteria (no prefix - it's clear these need work)\n newTasks = findings.unmetCriteria;\n } else {\n // Fall back to creating tasks from unmet acceptance criteria\n newTasks = refinedUnmetCriteria;\n }\n }\n \n // Build implementation notes\n const notesLines = [];\n if (findings.summary) {\n notesLines.push(findings.summary);\n }\n if (findings.verifiedCriteria.length > 0) {\n notesLines.push('');\n notesLines.push('Verifier confirmed these criteria were met:');\n for (const criterion of findings.verifiedCriteria) {\n notesLines.push(`- ✓ ${criterion}`);\n }\n }\n if (findings.gaps.length > 0 && incompleteTasks.length === 0) {\n notesLines.push('');\n notesLines.push('Verifier identified the following gaps:');\n for (const gap of findings.gaps) {\n","external_storage_diff",{"_973":974,"_975":-5},"files_modified",2,"lines_added","lines_removed",3,"commit_message","additional_parent_commit_shas","file_id","file_00000000886871f78bb33e988aafb39d","ttl",{"_104":306,"_53":96,"_108":306,"_978":979,"_980":981,"_982":983,"_143":-5,"_130":984},[95],"input_items",[1004,1005,1006,1007,1008,1009,1010,1011,1012,1013],"external_post_config",{"_985":986,"_239":170,"_987":284,"_250":-5,"_960":233,"_988":18,"_989":-5,"_990":-5,"_991":992,"_993":994,"_995":-5,"_996":-5,"_997":998,"_999":18,"_1000":70,"_1001":65,"_1002":18,"_1003":-5},"user_model_slug","slug",1767079050.987041,"installation_id",71148695,"pr_number","enable_internal_github_app_routing","gitlab_service_account_project_id","review_trigger","comment_id",3698506547,"comment_type","issue","pr_write_guard_token","pending_pr_reaction_id","pending_comment_reaction_id",321380861,"comment_if_no_findings","comment_on_error","share_url","is_parallel_review","review_summary_id",{"_104":927,"_108":306,"_339":1032},{"_291":292,"_293":294,"_1029":298,"_1030":140,"_302":-5,"_104":1031},{"_104":1014,"_293":1028,"_329":-5,"_1016":-5,"_1017":-5},{"_104":1014,"_293":1027,"_329":-5,"_1016":-5,"_1017":-5},{"_104":1014,"_293":1026,"_329":-5,"_1016":-5,"_1017":-5},{"_104":1014,"_293":1025,"_329":592,"_1016":1019,"_1017":950},{"_104":1014,"_293":1023,"_329":592,"_1016":1019,"_1017":1024},{"_104":1014,"_293":1021,"_329":592,"_1016":1019,"_1017":1022},{"_104":1014,"_293":1018,"_329":592,"_1016":1019,"_1017":1020},{"_104":1014,"_293":1015,"_329":-5,"_1016":-5,"_1017":-5},"pull_request_comment","## Pull request overview\n\nThis PR improves the format of verifier follow-up issues by removing redundant prefixes and filtering out incorrectly captured markdown content from task lists, addressing user feedback about confusing issue #306 formatting.\n\n**Key Changes:**\n- Removes \"Satisfy:\" prefix from task items generated from unmet criteria\n- Adds filtering to prevent markdown section headers from being captured as acceptance criteria\n- Adds filtering to prevent PR/Issue reference lines from being captured as task items\n\n\n\n\n\n---\n\n💡 Add Copilot custom instructions for smarter, more guided reviews. Learn how to get started.","side","line","The check for `startsWith('##')` is redundant since any string starting with '##' will also start with '#'. The first condition will always catch both cases. Consider removing the `|| text.startsWith('##')` portion to simplify the logic without changing behavior.\n```suggestion\n if (text.startsWith('#')) {\n```","RIGHT",188,"The regex pattern is checking for text that starts with a hyphen/dash followed by \"PR\" or \"Issue\", but at this point `text` has already been extracted from the checkbox content (via `match[1].trim()`). The leading `-` or `*` was consumed by the checkbox pattern on line 184, so `text` will never start with `-` or `–`. \n\nFor example, if the input line is `- [ ] - PR #296 - Description`, then `match[1]` captures `- PR #296 - Description`, which will correctly match this pattern. However, if the input is `- [ ] PR #296 - Description` (without a leading dash after the checkbox), it won't match.\n\nConsider simplifying the pattern to `/^(PR|Issue)\\s*#\\d+/i` to match text that starts directly with \"PR\" or \"Issue\" followed by a number. Alternatively, if you want to handle both cases, use `/^[-–]?\\s*(PR|Issue)\\s*#\\d+/i` to make the leading dash optional.\n```suggestion\n // Skip items that look like markdown links to sections (e.g., \"- PR #123\" or \"PR #123\")\n if (/^[-–]?\\s*(PR|Issue)\\s*#\\d+/i.test(text)) {\n```",192,"There's an inconsistency in how tasks are generated. When gaps are identified (line 362), tasks are prefixed with \"Address:\", but when unmet criteria or refined unmet criteria are used (lines 365, 368), no prefix is added. This creates inconsistent task formatting in the follow-up issue.\n\nFor consistency, consider either:\n1. Removing the \"Address:\" prefix on line 362 to match the other cases (recommended based on the PR's rationale)\n2. Adding appropriate prefixes to lines 365 and 368 to match line 362\n\nThe first option aligns with the PR description's goal of removing redundant prefixes since task list items already imply they need work.",368,"The new filtering logic for markdown headers and PR/Issue references lacks test coverage. The existing tests in `__tests__/verifier-issue-formatter.test.js` for `extractUncheckedItems` don't cover these scenarios. Consider adding tests to verify that:\n1. Checkbox items containing markdown headers (e.g., `- [ ] ## Related`) are filtered out\n2. Checkbox items that are PR/Issue references (e.g., `- [ ] - PR #296 - Description`) are filtered out\n3. Normal checkbox items are still extracted correctly\n\nThis would help prevent regressions and validate the fix for issue #306.","\n## 🤖 Keepalive Loop Status\n\n**PR #310** | Agent: **Codex** | Iteration 0/5\n\n### Current State\n| Metric | Value |\n|--------|-------|\n| Iteration progress | [----------] 0/5 |\n| Action | wait (missing-agent-label) |\n| Gate | success |\n| Tasks | 0/2 complete |\n| Keepalive | ❌ disabled |\n| Autofix | ❌ disabled |\n\n### 🔍 Failure Classification\n| Error type | infrastructure |\n| Error category | resource |\n| Suggested recovery | Confirm the referenced resource exists (repo, PR, branch, workflow, or file). |\n\n","\n## Automated Status Summary\n**Head SHA:** b8957a84bbaae230852ac207c57c3304c5b306cf\n**Latest Runs:** ⏳ pending — Gate\n**Required contexts:** Gate / gate, Health 45 Agents Guard / Enforce agents workflow protections\n**Required:** core tests (3.11): ⏳ pending, core tests (3.12): ⏳ pending, docker smoke: ⏳ pending, gate: ⏳ pending\n\n| Workflow / Job | Result | Logs |\n|----------------|--------|------|\n| _(no jobs reported)_ | ⏳ pending | — |\n\n### Coverage Overview\n- Coverage history entries: 1\n## Coverage Trend\n\n| Metric | Value |\n|--------|-------|\n| Current | 0.00% |\n| Baseline | 85.00% |\n| Delta | -85.00% |\n| Minimum | 70.00% |\n| Status | ❌ Below minimum |\n\n### Top Coverage Hotspots (lowest coverage)\n\n| File | Coverage | Missing |\n|------|----------|---------|\n| `src/trend_analysis/_autofix_trigger_sample.py` | 0.0% | 10 |\n| `src/trend_analysis/_autofix_violation_case2.py` | 0.0% | 15 |\n| `src/trend_analysis/_autofix_violation_case3.py` | 0.0% | 13 |\n| `src/trend_analysis/_ci_probe_faults.py` | 0.0% | 18 |\n| `src/trend_analysis/automation_multifailure.py` | 0.0% | 4 |\n| `src/trend_analysis/constants.py` | 0.0% | 1 |\n| `src/trend_analysis/selector.py` | 0.0% | 12 |\n| `src/trend_analysis/weighting.py` | 0.0% | 11 |\n| `src/trend_analysis/__init__.py` | 100.0% | 0 |\n### Low Coverage Files (<50.0%)\n\n| File | Coverage | Missing |\n|------|----------|---------|\n| `src/trend_analysis/_autofix_trigger_sample.py` | 0.0% | 10 |\n| `src/trend_analysis/_autofix_violation_case2.py` | 0.0% | 15 |\n| `src/trend_analysis/_autofix_violation_case3.py` | 0.0% | 13 |\n| `src/trend_analysis/_ci_probe_faults.py` | 0.0% | 18 |\n| `src/trend_analysis/automation_multifailure.py` | 0.0% | 4 |\n| `src/trend_analysis/constants.py` | 0.0% | 1 |\n| `src/trend_analysis/selector.py` | 0.0% | 12 |\n| `src/trend_analysis/weighting.py` | 0.0% | 11 |\n\n_Updated automatically; will refresh on subsequent CI/Docker completions._\n\n\n---\n### Keepalive checklist\n\n#### Scope\n_No scope information available_\n\n#### Tasks\n- [ ] _No tasks defined_\n\n#### Acceptance criteria\n- [ ] _No acceptance criteria defined_","\n⚠️ **Action Required**: Unable to determine source issue for PR #310. 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