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bash\nset -euo pipefail\n\nLOG_PREFIX=\"[workflows-codex-env]\"\nlog() { printf \"%s %s\\n\" \"$LOG_PREFIX\" \"$*\"; }\nwarn() { printf \"%s [warn] %s\\n\" \"$LOG_PREFIX\" \"$*\" >&2; }\ndie() { printf \"%s [error] %s\\n\" \"$LOG_PREFIX\" \"$*\" >&2; exit 1; }\n\n# -----------------------------\n# Locate Workflows repo root robustly (Codex scripts run from /tmp)\n# -----------------------------\nis_workflows_root() {\n local d=\"$1\"\n [[ -f \"${d}/pyproject.toml\" ]] || return 1\n [[ -f \"${d}/scripts/dev_check.sh\" ]] || return 1\n grep -q 'name = \"workflows\"' \"${d}/pyproject.toml\" 2>/dev/null || return 1\n return 0\n}\n\nfind_repo_root() {\n # 1) Prefer git root, but verify it's the Workflows repo.\n if command -v git >/dev/null 2>&1; then\n if git rev-parse --show-toplevel >/dev/null 2>&1; then\n local gr\n gr=\"$(git rev-parse --show-toplevel)\"\n if is_workflows_root \"${gr}\"; then\n echo \"${gr}\"\n return 0\n fi\n fi\n fi\n\n # 2) Walk upwards from current directory.\n local d=\"${PWD}\"\n while [[ \"${d}\" != \"/\" ]]; do\n if is_workflows_root \"${d}\"; then\n echo \"${d}\"\n return 0\n fi\n d=\"$(dirname \"${d}\")\"\n done\n\n # 3) Last resort: search common mount points.\n local bases=(\"${PWD}\" \"${GITHUB_WORKSPACE:-}\" \"/workspace\" \"/repo\" \"${HOME:-/home}\" \"/tmp\")\n local b\n for b in \"${bases[@]}\"; do\n [[ -n \"${b}\" && -d \"${b}\" ]] || continue\n while IFS= read -r py; do\n local cand\n cand=\"$(cd \"$(dirname \"${py}\")\" && pwd)\"\n if is_workflows_root \"${cand}\"; then\n echo \"${cand}\"\n return 0\n fi\n done < <(find \"${b}\" -maxdepth 5 -type f -name pyproject.toml 2>/dev/null | head -n 100)\n done\n\n return 1\n}\n\nREPO_ROOT=\"$(find_repo_root || true)\"\n[[ -n \"${REPO_ROOT}\" ]] || die \"Could not locate Workflows repo root (pyproject.toml + scripts/dev_check.sh + name='workflows').\"\n\ncd \"${REPO_ROOT}\"\nlog \"Repo root: ${REPO_ROOT}\"\n\n# Git sanity (best-effort)\nif command -v git >/dev/null 2>&1; then\n git config --global --add safe.directory \"${REPO_ROOT}\" >/dev/null 2>&1 || true\n git config --global user.name \"${GIT_AUTHOR_NAME:-Codex}\" >/dev/null 2>&1 || true\n git config --global user.email \"${GIT_AUTHOR_EMAIL:-codex@users.noreply.github.com}\" >/dev/null 2>&1 || true\nfi\n\n# -----------------------------\n# Python + venv (repo requires 3.11+)\n# -----------------------------\nPYTHON_BIN=\"${PYTHON_BIN:-python3}\"\ncommand -v \"${PYTHON_BIN}\" >/dev/null 2>&1 || die \"python3 not found on PATH.\"\n\n\"${PYTHON_BIN}\" - <<'PY'\nimport sys\nif sys.version_info < (3, 11):\n raise SystemExit(f\"Python 3.11+ required; found {sys.version.split()[0]}\")\nprint(\"Python OK:\", sys.version.split()[0])\nPY\n\nVENV_PATH=\"${REPO_ROOT}/.venv\"\nif [[ ! -d \"${VENV_PATH}\" ]]; then\n log \"Creating venv at ${VENV_PATH}\"\n \"${PYTHON_BIN}\" -m venv \"${VENV_PATH}\"\nfi\n# shellcheck disable=SC1091\nsource \"${VENV_PATH}/bin/activate\"\n\npython -m pip install -U pip setuptools wheel >/dev/null\n\n# -----------------------------\n# Optional lockfile sync (if present)\n# -----------------------------\npython -m pip install -U uv >/dev/null || true\n\nLOCK_FILE=\"${REPO_ROOT}/requirements.lock\"\nif [[ -f \"${LOCK_FILE}\" ]]; then\n log \"Found requirements.lock; syncing with uv (best-effort)\"\n uv pip sync \"${LOCK_FILE}\" || true\nelse\n log \"No requirements.lock found (expected for this repo).\"\nfi\n\n# -----------------------------\n# Install pyproject dependencies + dev extras WITHOUT installing the repo itself\n# (Avoids editable-build failure due to flat-layout multiple top-level packages.)\n# -----------------------------\nlog \"Installing deps + dev tools from pyproject.toml (no editable install)...\"\npython - <<'PY'\nfrom __future__ import annotations\nfrom pathlib import Path\nimport subprocess, sys\n\ntry:\n import tomllib # py3.11+\nexcept ModuleNotFoundError:\n subprocess.check_call([sys.executable, \"-m\", \"pip\", \"install\", \"tomli\"])\n import tomli as tomllib # type: ignore\n\ndata = tomllib.loads(Path(\"pyproject.toml\").read_text(encoding=\"utf-8\"))\nproj = data.get(\"project\", {}) or {}\n\ndeps = list(proj.get(\"dependencies\", []) or [])\ndev = list((proj.get(\"optional-dependencies\", {}) or {}).get(\"dev\", []) or [])\n\n# de-dup while preserving order\nseen = set()\npkgs = []\nfor p in deps + dev:\n if p not in seen:\n pkgs.append(p)\n seen.add(p)\n\nif pkgs:\n subprocess.check_call([sys.executable, \"-m\", \"pip\", \"install\", *pkgs])\nelse:\n print(\"[workflows-codex-env] [warn] No dependencies/dev extras found in pyproject.toml.\")\nPY\n\n# -----------------------------\n# Ensure required test packages (the ones your checker flags as missing)\n# -----------------------------\nlog \"Ensuring required test packages are installed...\"\npython - <<'PY'\nimport importlib, subprocess, sys\n\nrequired = {\n \"pytest\": \"pytest\",\n \"coverage\": \"coverage\",\n \"hypothesis\": \"hypothesis\",\n \"pandas\": \"pandas\",\n \"numpy\": \"numpy\",\n \"pydantic\": \"pydantic\",\n \"yaml\": \"PyYAML\",\n \"requests\": \"requests\",\n \"jsonschema\": \"jsonschema\",\n}\n\nmissing = []\nfor mod, pkg in required.items():\n try:\n importlib.import_module(mod)\n except Exception:\n missing.append(pkg)\n\nif missing:\n print(\"[workflows-codex-env] Installing missing:\", \" \".join(missing))\n subprocess.check_call([sys.executable, \"-m\", \"pip\", \"install\", *missing])\nelse:\n print(\"[workflows-codex-env] Required packages already present.\")\nPY\n\n# -----------------------------\n# Make local modules importable (agents/, templates/, etc.)\n# -----------------------------\nexport PYTHONPATH=\"${REPO_ROOT}${PYTHONPATH:+:${PYTHONPATH}}\"\n\n# Persist env for interactive shells (best-effort)\nMARKER=\"# >>> Workflows Codex env >>>\"\nif [[ -w \"${HOME}/.bashrc\" ]] && ! grep -qs \"${MARKER}\" \"${HOME}/.bashrc\"; then\n {\n echo \"\"\n echo \"${MARKER}\"\n echo \"export WORKFLOWS_REPO_ROOT=\\\"${REPO_ROOT}\\\"\"\n echo \"export VIRTUAL_ENV=\\\"${REPO_ROOT}/.venv\\\"\"\n echo \"export PATH=\\\"${REPO_ROOT}/.venv/bin:\\$PATH\\\"\"\n echo \"export PYTHONPATH=\\\"${REPO_ROOT}\\${PYTHONPATH:+:\\$PYTHONPATH}\\\"\"\n echo \"# <<< Workflows Codex env <<<\"\n } >> \"${HOME}/.bashrc\" || true\nfi\n\n# -----------------------------\n# Optional: run repo dependency checker (should be clean now; don't brick setup if it isn't)\n# -----------------------------\nif [[ -x \"${REPO_ROOT}/scripts/check_test_dependencies.sh\" ]]; then\n log \"Running scripts/check_test_dependencies.sh (non-fatal)\"\n bash \"${REPO_ROOT}/scripts/check_test_dependencies.sh\" || true\nfi\n\nlog \"Setup complete. Common next commands:\"\nlog \" ./scripts/dev_check.sh\"\nlog \" ./scripts/validate_fast.sh\"\n","mode","on","preset_allowlist","allowlist_domains","pypi.org, github.com, files.pythonhosted.org, deb.debian.org, security.ubuntu.com, raw.githubusercontent.com","allowlist_rules","denylist_domains","safe_methods_only","number",904,"https://github.com/stranske/Workflows/pull/904","state","closed","merged","mergeable","draft","title","Codex/issue 895","body","\n> **Source:** Issue #895\n\n\n\n\n## Automated Status Summary\n#### Scope\n```markdown\n## Why\nPR #894 addressed issue #893 but verification identified concerns (verdict: **Unknown**). This follow-up addresses the remaining gaps with improved task structure to ensure compliance with the rewritten acceptance criteria.\n\n## Tasks\n\n\n## Context for Agent\n\n### Related Issues/PRs\n- [#895](https://github.com/stranske/Workflows/issues/895)\n- [#894](https://github.com/stranske/Workflows/issues/894)\n- [#893](https://github.com/stranske/Workflows/issues/893)\n\n### References\n- https://github.com/stranske/Workflows/compare/main...codex/issue-895?expand=1\n\n\n#### Tasks\n- [ ] Update the `agents-auto-pilot.yml` workflow file to include steps that call the metrics collector and timer utilities.\n- [ ] Enhance the metrics collector script by adding aggregation logic to generate summary metrics reports and support CLI output.\n- [ ] Modify the failure handling within the collector and timer utilities to capture a richer set of contextual details.\n- [ ] Implement redaction/sanitization safeguards in the metrics collection process.\n- [ ] Update documentation to clearly explain how to interpret the metrics outputs.\n\n#### Acceptance criteria\n- [ ] The `agents-auto-pilot.yml` workflow file includes explicit steps that invoke the metrics collector and step timer utilities.\n- [ ] The metrics collector script generates a summary metrics report and supports CLI output.\n- [ ] Failure handling in the metrics collector and timer utilities captures exit codes, step names, error categories, and environment details.\n- [ ] The metrics collection process includes redaction/sanitization safeguards to prevent logging sensitive information.\n- [ ] The `metrics_collection.md` documentation clearly explains how to interpret the metrics outputs, including examples.\n\n**Head SHA:** a6d0b83ced3eb82785d0a9e9bb627d6ed2929191\n**Latest Runs:** ✅ success — Gate\n**Required:** gate: ✅ success\n\n| Workflow / Job | Result | Logs |\n|----------------|--------|------|\n| Agents PR meta manager | ❔ in progress | [View run](https://github.com/stranske/Workflows/actions/runs/21082864436) |\n| CI Autofix Loop | ✅ success | [View run](https://github.com/stranske/Workflows/actions/runs/21082726918) |\n| Gate | ✅ success | [View run](https://github.com/stranske/Workflows/actions/runs/21082726911) |\n| Health 40 Sweep | ✅ success | [View run](https://github.com/stranske/Workflows/actions/runs/21082726894) |\n| Health 44 Gate Branch Protection | ✅ success | [View run](https://github.com/stranske/Workflows/actions/runs/21082726898) |\n| Health 45 Agents Guard | ✅ success | [View run](https://github.com/stranske/Workflows/actions/runs/21082726881) |\n| Health 50 Security Scan | ✅ success | [View run](https://github.com/stranske/Workflows/actions/runs/21082726903) |\n| Maint 52 Validate Workflows | ✅ success | [View run](https://github.com/stranske/Workflows/actions/runs/21082726906) |\n| PR 11 - Minimal invariant CI | ✅ success | [View run](https://github.com/stranske/Workflows/actions/runs/21082726914) |\n| Selftest CI | ✅ success | [View run](https://github.com/stranske/Workflows/actions/runs/21082726915) |\n| Validate Sync Manifest | ✅ success | [View run](https://github.com/stranske/Workflows/actions/runs/21082726927) |\n","base","head","base_sha","e305b91a83e690e28b1f86946767d55841cd63ff","head_sha","head_repo_id","head_repo_full_name","merge_commit_sha","e44a3519e611b9ae4f0d45f500c84a03fd2385d9","comments","diff","user",{"_266":267,"_159":267,"_315":-5,"_270":271,"_53":268},"commits",24,"changed_files",2,"additions",15,"deletions","email","events",[],[],"messages",[],{"_104":596,"_108":105,"_363":597},{"_104":349,"_350":351},{"_104":324,"_325":326,"_327":328,"_329":330,"_331":-5},"pr","pr_title","Add tests for cancelled CI handling in gate_summary","pr_message","### Motivation\n- The gate summary logic was updated to treat cancelled CI runs as pending so reruns can proceed, and tests were missing to cover the new behaviour for both Python CI and Docker smoke checks.\n\n### Description\n- Add two unit tests to `tests/workflows/github_scripts/test_gate_summary.py` named `test_summary_marks_cancelled_python_as_pending` and `test_summary_marks_cancelled_docker_as_pending` that exercise the cancelled branches in `summarize`.\n- Each test asserts that `state` is `pending`, the `description` matches the expected message, and that `cosmetic_failure` and `format_failure` remain false.\n\n### Testing\n- No automated test run was executed as part of this change; the additions are standard `pytest` unit tests under `tests/workflows/github_scripts/` and are expected to be picked up by the repository CI.","output_diff",{"_104":329,"_332":333,"_139":140,"_334":-5,"_305":335,"_336":337,"_338":339,"_340":341,"_342":43,"_343":344,"_345":-5},"pre_apply_patch","repo_id","/workspace/Workflows","preapply_patch_base_commit_sha","diff --git a/tests/workflows/github_scripts/test_gate_summary.py b/tests/workflows/github_scripts/test_gate_summary.py\nindex f75f1b738d0f75b08f8f286c7effc7e2ead98173..93a23d7c88c1e85f03b3eefca4fa06d285bcd71d 100644\n--- a/tests/workflows/github_scripts/test_gate_summary.py\n+++ b/tests/workflows/github_scripts/test_gate_summary.py\n@@ -89,50 +89,92 @@ def test_active_summary_reads_artifacts(tmp_path: Path) -> None:\n \"python_outcome, expected_state\",\n [(\"failure\", \"failure\"), (\"success\", \"success\")],\n )\n def test_summary_state_reflects_python_outcome(\n tmp_path: Path, python_outcome: str, expected_state: str\n ) -> None:\n write_summary(tmp_path, \"3.12\", lint=\"failure\", tests=python_outcome)\n context = gate_summary.SummaryContext(\n doc_only=False,\n run_core=True,\n reason=\"\",\n python_result=python_outcome,\n docker_result=\"success\",\n docker_changed=True,\n artifacts_root=tmp_path,\n summary_path=None,\n output_path=None,\n )\n \n result = gate_summary.summarize(context)\n assert result.state == expected_state\n assert result.cosmetic_failure is False\n assert result.format_failure is False\n \n \n+def test_summary_marks_cancelled_python_as_pending(tmp_path: Path) -> None:\n+ write_summary(tmp_path, \"3.12\", tests=\"cancelled\")\n+ context = gate_summary.SummaryContext(\n+ doc_only=False,\n+ run_core=True,\n+ reason=\"\",\n+ python_result=\"cancelled\",\n+ docker_result=\"success\",\n+ docker_changed=True,\n+ artifacts_root=tmp_path,\n+ summary_path=None,\n+ output_path=None,\n+ )\n+\n+ result = gate_summary.summarize(context)\n+ assert result.state == \"pending\"\n+ assert result.description == \"Python CI cancelled; waiting for rerun.\"\n+ assert result.cosmetic_failure is False\n+ assert result.format_failure is False\n+\n+\n+def test_summary_marks_cancelled_docker_as_pending(tmp_path: Path) -> None:\n+ write_summary(tmp_path, \"3.12\")\n+ context = gate_summary.SummaryContext(\n+ doc_only=False,\n+ run_core=True,\n+ reason=\"\",\n+ python_result=\"success\",\n+ docker_result=\"cancelled\",\n+ docker_changed=True,\n+ artifacts_root=tmp_path,\n+ summary_path=None,\n+ output_path=None,\n+ )\n+\n+ result = gate_summary.summarize(context)\n+ assert result.state == \"pending\"\n+ assert result.description == \"Docker smoke cancelled; waiting for rerun.\"\n+ assert result.cosmetic_failure is False\n+ assert result.format_failure is False\n+\n+\n def test_cosmetic_failure_detected(tmp_path: Path) -> None:\n write_summary(tmp_path, \"3.11\", format_outcome=\"failure\")\n context = gate_summary.SummaryContext(\n doc_only=False,\n run_core=True,\n reason=\"\",\n python_result=\"failure\",\n docker_result=\"success\",\n docker_changed=False,\n artifacts_root=tmp_path,\n summary_path=None,\n output_path=None,\n )\n \n result = gate_summary.summarize(context)\n assert result.state == \"failure\"\n assert result.cosmetic_failure is True\n assert result.failure_checks == (\"format\",)\n assert result.format_failure is True\n \n \n def test_cosmetic_failure_rejects_other_failures(tmp_path: Path) -> None:\n write_summary(tmp_path, \"3.11\", tests=\"failure\")\n context = gate_summary.SummaryContext(\n doc_only=False,\n","external_storage_diff",{"_346":347,"_348":-5},"files_modified",1,"lines_added",42,"lines_removed","commit_message","Add cancelled CI tests for gate summary","additional_parent_commit_shas","file_id","file_000000003efc71f7b04dc86f1c89564a","ttl","partial_repo_snapshot","files",[352],{"_353":354,"_355":-5,"_356":357,"_358":-5},"path","tests/workflows/github_scripts/test_gate_summary.py","contents","line_range_contents",[359],"missing_reason",{"_360":339,"_361":362,"_363":364,"_365":70},"line_range_start","line_range_end",451,"content",[366,213,367,368,369,213,370,213,371,372,373,374,213,375,213,213,376,377,378,379,380,381,382,383,384,385,386,387,388,389,390,391,392,393,394,395,396,397,398,213,213,399,400,401,402,403,404,405,406,407,408,409,410,213,411,412,413,414,415,213,213,416,417,213,400,418,419,420,404,421,406,422,408,409,410,213,411,423,412,424,425,426,427,428,415,213,213,429,430,431,432,433,434,384,435,400,418,419,420,436,421,437,422,408,409,410,213,411,438,428,415,213,213,439,440,400,418,419,420,441,421,437,422,408,409,410,213,411,442,443,428,415,213,213,444,445,400,418,419,420,404,446,437,422,408,409,410,213,411,442,447,428,415,213,213,448,449,400,418,419,420,450,421,406,422,408,409,410,213,411,451,452,453,454,213,213,455,456,400,418,419,420,450,421,406,422,408,409,410,213,411,451,428,415,213,213,457,449,458,213,400,418,419,420,450,421,406,422,408,409,410,213,411,451,452,459,454,213,213,460,461,462,463,213,213,464,465,384,466,213,467,468,213,469,470,471,213,472,468,213,473,474,475,476,213,477,213,478,479,480,481,213,482,483,213,484,485,486,487,483,213,213,488,489,490,491,492,493,213,213,494,495,496,497,389,498,499,500,501,395,502,397,213,503,504,505,506,507,508,509,510,511,213,512,513,213,514,504,505,506,507,508,509,510,515,410,213,516,213,213,517,518,519,213,213,520,521,522,213,213,523,417,400,418,419,420,524,421,406,422,408,409,410,213,411,451,525,213,213,526,445,400,418,419,420,404,527,437,422,408,409,410,213,411,451,528,529,213,213,530,531,532,533,534,535,536,537,538,539,540,541,542,213,543,544,545,546,547,548,549,550,551,552,213,213,553,554,555,213,213,556,539,540,213,557,558,559,560,561,562,563,541,542,213,564,213,565,566,567,568,213,213,569,570,571,572,573,574,575,576,410,213,539,577,213,578,579,213,580,581,213,565,566,213,582,583,584,585,213,586,587,588,589,590,591,592,410,213,593,594,595],"contains_end_of_file","from __future__ import annotations","import json","import sys","from pathlib import Path","import pytest","# Add script directory to path before importing gate_summary","SCRIPT_DIR = Path(__file__).resolve().parents[3] / \".github\" / \"scripts\"","if str(SCRIPT_DIR) not in sys.path:"," sys.path.insert(0, str(SCRIPT_DIR))","import gate_summary # noqa: E402","def write_summary("," root: Path,"," runtime: str,"," *,"," format_outcome: str = \"success\","," lint: str = \"success\","," tests: str = \"success\","," type_check: str = \"success\",",") -> None:"," summary_dir = root / \"downloads\" / runtime"," summary_dir.mkdir(parents=True, exist_ok=True)"," payload = {"," \"python_version\": runtime,"," \"checks\": {"," \"format\": {\"outcome\": format_outcome},"," \"lint\": {\"outcome\": lint},"," \"tests\": {\"outcome\": tests},"," \"type_check\": {\"outcome\": type_check},"," \"coverage_minimum\": {\"outcome\": \"success\"},"," },"," \"coverage\": {\"percent\": 91.23},"," }"," (summary_dir / \"summary.json\").write_text(json.dumps(payload), encoding=\"utf-8\")","def test_doc_only_summary_state() -> None:"," context = gate_summary.SummaryContext("," doc_only=True,"," run_core=False,"," reason=\"docs_only\","," python_result=\"success\","," docker_result=\"skipped\","," docker_changed=False,"," artifacts_root=Path(\"/tmp/nonexistent\"),"," summary_path=None,"," output_path=None,"," )"," result = gate_summary.summarize(context)"," assert result.state == \"success\""," assert \"docs-only\" in \"\\n\".join(result.lines)"," assert any(\"| docs-only | success |\" in line for line in result.lines)"," assert result.format_failure is False","def test_active_summary_reads_artifacts(tmp_path: Path) -> None:"," write_summary(tmp_path, \"3.11\")"," doc_only=False,"," run_core=True,"," reason=\"\","," docker_result=\"success\","," artifacts_root=tmp_path,"," joined = \"\\n\".join(result.lines)"," assert \"Gate status\" in joined"," assert \"Reported coverage\" in joined"," assert \"Docker smoke skipped\" in joined"," assert \"| docker-smoke | success |\" in joined"," assert result.cosmetic_failure is False","@pytest.mark.parametrize("," \"python_outcome, expected_state\","," [(\"failure\", \"failure\"), (\"success\", \"success\")],",")","def test_summary_state_reflects_python_outcome("," tmp_path: Path, python_outcome: str, expected_state: str"," write_summary(tmp_path, \"3.12\", lint=\"failure\", tests=python_outcome)"," python_result=python_outcome,"," docker_changed=True,"," assert result.state == expected_state","def test_summary_marks_cancelled_python_as_pending(tmp_path: Path) -> None:"," write_summary(tmp_path, \"3.12\", tests=\"cancelled\")"," python_result=\"cancelled\","," assert result.state == \"pending\""," assert result.description == \"Python CI cancelled; waiting for rerun.\"","def test_summary_marks_cancelled_docker_as_pending(tmp_path: Path) -> None:"," write_summary(tmp_path, \"3.12\")"," docker_result=\"cancelled\","," assert result.description == \"Docker smoke cancelled; waiting for rerun.\"","def test_cosmetic_failure_detected(tmp_path: Path) -> None:"," write_summary(tmp_path, \"3.11\", format_outcome=\"failure\")"," python_result=\"failure\","," assert result.state == \"failure\""," assert result.cosmetic_failure is True"," assert result.failure_checks == (\"format\",)"," assert result.format_failure is True","def test_cosmetic_failure_rejects_other_failures(tmp_path: Path) -> None:"," write_summary(tmp_path, \"3.11\", tests=\"failure\")","def test_cosmetic_failure_reports_all_allowed_checks(tmp_path: Path) -> None:"," write_summary(tmp_path, \"3.12\", lint=\"failure\")"," assert result.failure_checks == (\"format\", \"lint\")","def test_normalize_handles_missing_and_blank_values() -> None:"," assert gate_summary._normalize(None) == \"unknown\""," assert gate_summary._normalize(\" \") == \"unknown\""," assert gate_summary._normalize(\" SUCCESS \") == \"success\"","def test_load_summary_records_handles_missing_and_invalid("," tmp_path: Path, monkeypatch: pytest.MonkeyPatch"," artifacts_root = tmp_path / \"artifacts\""," # Missing downloads directory returns an empty list"," assert gate_summary._load_summary_records(artifacts_root) == []"," downloads = artifacts_root / \"downloads\" / \"job\""," downloads.mkdir(parents=True)"," (downloads / \"summary.json\").write_text(\"{not-json\", encoding=\"utf-8\")"," # Invalid JSON entries are ignored"," # Inject a record outside of artifacts_root to exercise the ValueError branch"," outside = tmp_path / \"outside\" / \"summary.json\""," outside.parent.mkdir(parents=True)"," outside.write_text(\"{}\", encoding=\"utf-8\")"," original_rglob = Path.rglob"," def fake_rglob(self: Path, pattern: str):"," if self == artifacts_root / \"downloads\":"," return [outside]"," return original_rglob(self, pattern)"," monkeypatch.setattr(Path, \"rglob\", fake_rglob)"," assert gate_summary._load_summary_records(artifacts_root) == [{\"job_name\": \"unknown\"}]"," # Non-dict payloads are skipped safely"," broken = downloads / \"bad_type\" / \"summary.json\""," broken.parent.mkdir(parents=True, exist_ok=True)"," broken.write_text(\"[]\", encoding=\"utf-8\")","def test_detect_cosmetic_failure_handles_non_mappings() -> None:"," # Non-mapping records are ignored"," assert gate_summary._detect_cosmetic_failure([\"oops\"]) == (False, ())"," # Records missing mapping checks short-circuit to False"," assert gate_summary._detect_cosmetic_failure([{\"checks\": []}]) == (False, ())"," assert gate_summary._normalize_check_outcome(None) == \"unknown\"","def test_collect_table_handles_missing_percent() -> None:"," record = {"," \"python_version\": \"3.12\","," \"job_name\": \"gate\","," \"lint\": {\"outcome\": \"success\"},"," \"type_check\": {\"outcome\": \"success\"},"," \"tests\": {\"outcome\": \"success\"},"," \"coverage_minimum\": {\"outcome\": \"pending\"},"," \"coverage\": {\"percent\": None},"," ("," table,"," lint_entries,"," type_entries,"," test_entries,"," coverage_entries,"," coverage_percents,"," job_results,"," ) = gate_summary._collect_table([record])"," assert table[-1].endswith(\"| — |\")"," assert coverage_percents == []"," lines = gate_summary._active_lines("," docker_result=\"pending\","," assert not any(\"Reported coverage\" in line for line in lines)","def test_doc_only_lines_reports_custom_reason() -> None:"," lines = gate_summary._doc_only_lines(\"workflow_only\")"," assert \"workflow_only\" in \"\\n\".join(lines)","def test_doc_only_lines_defaults_reason() -> None:"," lines = gate_summary._doc_only_lines(\"\")"," assert \"docs-only\" in \"\\n\".join(lines)","def test_summarize_handles_skipped_python_when_core_runs(tmp_path: Path) -> None:"," python_result=\"skipped\","," assert \"Python CI result: skipped.\" in result.description","def test_summarize_handles_docker_failures(tmp_path: Path) -> None:"," docker_result=\"failure\","," assert \"Docker smoke result: failure.\" in result.description"," assert any(\"docker-smoke\" in line for line in result.lines)","def test_build_context_reads_environment(monkeypatch: pytest.MonkeyPatch, tmp_path: Path) -> None:"," monkeypatch.setenv(\"DOC_ONLY\", \"TRUE\")"," monkeypatch.setenv(\"RUN_CORE\", \"False\")"," monkeypatch.setenv(\"REASON\", \"workflow_only\")"," monkeypatch.setenv(\"PYTHON_RESULT\", \"FAILURE\")"," monkeypatch.setenv(\"DOCKER_RESULT\", \"cancelled\")"," monkeypatch.setenv(\"DOCKER_CHANGED\", \"TRUE\")"," artifacts_root = tmp_path / \"gate_artifacts\""," monkeypatch.setenv(\"GATE_ARTIFACTS_ROOT\", str(artifacts_root))"," summary_path = tmp_path / \"summary\" / \"summary.md\""," output_path = tmp_path / \"output\" / \"output.txt\""," monkeypatch.setenv(\"GITHUB_STEP_SUMMARY\", str(summary_path))"," monkeypatch.setenv(\"GITHUB_OUTPUT\", str(output_path))"," context = gate_summary.build_context()"," assert context.doc_only is True"," assert context.run_core is False"," assert context.reason == \"workflow_only\""," assert context.python_result == \"FAILURE\""," assert context.docker_result == \"cancelled\""," assert context.docker_changed is True"," assert context.artifacts_root == artifacts_root"," assert context.summary_path == summary_path"," assert context.output_path == output_path","def test_resolve_path_handles_missing(monkeypatch: pytest.MonkeyPatch) -> None:"," monkeypatch.delenv(\"NOT_SET\", raising=False)"," assert gate_summary._resolve_path(\"NOT_SET\") is None","def test_main_writes_summary_and_output(monkeypatch: pytest.MonkeyPatch, tmp_path: Path) -> None:"," monkeypatch.setenv(\"DOC_ONLY\", \"true\")"," monkeypatch.setenv(\"RUN_CORE\", \"false\")"," monkeypatch.delenv(\"REASON\", raising=False)"," monkeypatch.delenv(\"PYTHON_RESULT\", raising=False)"," monkeypatch.delenv(\"DOCKER_RESULT\", raising=False)"," monkeypatch.delenv(\"DOCKER_CHANGED\", raising=False)"," monkeypatch.setenv(\"GATE_ARTIFACTS_ROOT\", str(tmp_path / \"artifacts\"))"," assert gate_summary.main() == 0"," summary_text = summary_path.read_text(encoding=\"utf-8\")"," output_text = output_path.read_text(encoding=\"utf-8\")"," assert \"Docs-only\" in summary_text"," assert \"state=success\" in output_text","def test_write_summary_and_outputs(tmp_path: Path) -> None:"," result = gate_summary.SummaryResult("," lines=[\"one\", \"two\"],"," state=\"failure\","," description=\"bad\","," cosmetic_failure=True,"," failure_checks=(\"format\", \"lint\"),"," format_failure=True,"," output_path = tmp_path / \"outputs\" / \"values.txt\""," gate_summary._write_summary(result, None)"," gate_summary._write_outputs(result, None)"," gate_summary._write_summary(result, summary_path)"," gate_summary._write_outputs(result, output_path)"," assert \"one\\ntwo\" in summary_text"," assert \"state=failure\" in output_text"," assert \"failure_checks=format,lint\" in output_text"," assert \"format_failure=true\" in output_text"," clean_result = gate_summary.SummaryResult("," lines=[\"clean\"],"," state=\"success\","," description=\"ok\","," cosmetic_failure=False,"," failure_checks=(),"," format_failure=False,"," gate_summary._write_outputs(clean_result, output_path)"," updated_text = output_path.read_text(encoding=\"utf-8\")"," assert \"failure_checks=\" in updated_text","message",[598,599,600,601,602],{"_603":57,"_57":610},{"_603":605,"_353":354,"_360":609,"_361":607},{"_603":57,"_57":608},{"_603":605,"_353":354,"_360":606,"_361":607},{"_603":57,"_57":604},"content_type","\n\n**Testing**\n* ⚠️ `not run (not requested)`","repo_file_citation",135,153,"\n* Added coverage for cancelled Docker smoke gate summary handling with pending state/description assertions.",114,"**Summary**\n* Added coverage for cancelled Python CI gate summary handling with pending state/description assertions.",{"_104":306,"_53":96,"_108":306,"_613":614,"_615":616,"_617":618,"_143":-5,"_130":619},[95],"input_items",[639,640,641,642,643,644,645,646],"external_post_config",{"_620":621,"_239":170,"_622":284,"_250":-5,"_332":233,"_623":18,"_624":-5,"_625":-5,"_626":627,"_628":629,"_630":-5,"_631":-5,"_632":633,"_634":18,"_635":70,"_636":65,"_637":18,"_638":-5},"user_model_slug","slug",1768602388.634516,"installation_id",71148695,"pr_number","enable_internal_github_app_routing","gitlab_service_account_project_id","review_trigger","comment_id",3762044563,"comment_type","issue","pr_write_guard_token","pending_pr_reaction_id","pending_comment_reaction_id",324462789,"comment_if_no_findings","comment_on_error","share_url","is_parallel_review","review_summary_id",{"_104":596,"_108":306,"_363":664},{"_291":292,"_293":660,"_661":298,"_662":140,"_302":-5,"_104":663},{"_104":647,"_293":659,"_353":-5,"_649":-5,"_650":-5},{"_104":647,"_293":658,"_353":-5,"_649":-5,"_650":-5},{"_104":647,"_293":657,"_353":-5,"_649":-5,"_650":-5},{"_104":647,"_293":655,"_353":652,"_649":653,"_650":656},{"_104":647,"_293":651,"_353":652,"_649":653,"_650":654},{"_104":647,"_293":648,"_353":-5,"_649":-5,"_650":-5},"pull_request_comment","## Pull request overview\n\nThis PR adds manual trigger support to the Codex Belt Dispatcher workflow and improves gate check handling for cancelled CI runs.\n\n**Changes:**\n- Adds `workflow_dispatch` trigger to Codex Belt Dispatcher for manual execution\n- Implements special handling for cancelled Python CI and Docker smoke tests to set status as \"pending\" instead of \"failure\"\n\n### Reviewed changes\n\nCopilot reviewed 2 out of 2 changed files in this pull request and generated 2 comments.\n\n| File | Description |\n| ---- | ----------- |\n| .github/workflows/agents-71-codex-belt-dispatcher.yml | Adds workflow_dispatch trigger with same inputs as workflow_call for manual triggering |\n| .github/scripts/gate_summary.py | Adds logic to treat cancelled CI runs as \"pending\" rather than \"failure\" to allow for reruns |\n\n\n\n\n\n---\n\n💡 Add Copilot custom instructions for smarter, more guided reviews. Learn how to get started.","side","line","The new logic for handling cancelled Docker smoke status lacks test coverage. The existing test file `tests/workflows/github_scripts/test_gate_summary.py` does not test the cancelled state handling for Docker smoke tests. Add a test case that verifies when `docker_result_norm` is 'cancelled' and `docker_changed` is true, the state is set to 'pending' and the description is 'Docker smoke cancelled; waiting for rerun.'",".github/scripts/gate_summary.py","RIGHT",329,"The new logic for handling cancelled Python CI status lacks test coverage. The existing test file `tests/workflows/github_scripts/test_gate_summary.py` has comprehensive coverage for other scenarios but does not test the cancelled state handling introduced in this change. Add a test case that verifies when `python_result` is 'cancelled', the state is set to 'pending' and the description is 'Python CI cancelled; waiting for rerun.'",319,"\nStatus | ✅ no new diagnostics\nHistory points | 1\nTimestamp | 2026-01-16 22:24:42 UTC\nReport artifact | `autofix-report-pr-904`\nRemaining | 0\nNew | 0\nNo additional artifacts\n","\n## 🤖 Keepalive Loop Status\n\n**PR #904** | Agent: **Codex** | Iteration 0/5\n\n### Current State\n| Metric | Value |\n|--------|-------|\n| Iteration progress | [----------] 0/5 |\n| Action | wait (missing-agent-label) |\n| Disposition | skipped (transient) |\n| Gate | success |\n| Tasks | 0/4 complete |\n| Timeout | 45 min (default) |\n| Timeout usage | 2m elapsed (5%, 43m remaining) |\n| Keepalive | ❌ disabled |\n| Autofix | ❌ disabled |\n\n### 🔍 Failure Classification\n| Error type | infrastructure |\n| Error category | resource |\n| Suggested recovery | Confirm the referenced resource exists (repo, PR, branch, workflow, or file). |\n\n","\n## Automated Status Summary\n**Head SHA:** 8f4ef4b2d5e82bc87e92d6fe0cd9543fd4699058\n**Latest Runs:** ⏳ pending — Gate\n**Required contexts:** Gate / gate, Health 45 Agents Guard / Enforce agents workflow protections\n**Required:** core tests (3.11): ⏳ pending, core tests (3.12): ⏳ pending, docker smoke: ⏳ pending, gate: ⏳ pending\n\n| Workflow / Job | Result | Logs |\n|----------------|--------|------|\n| _(no jobs reported)_ | ⏳ pending | — |\n\n### Coverage Overview\n- Coverage history entries: 1\n## Coverage Trend\n\n| Metric | Value |\n|--------|-------|\n| Current | 92.21% |\n| Baseline | 85.00% |\n| Delta | +7.21% |\n| Minimum | 70.00% |\n| Status | ✅ Pass |\n\n### Top Coverage Hotspots (lowest coverage)\n\n| File | Coverage | Missing |\n|------|----------|---------|\n| `scripts/workflow_health_check.py` | 62.6% | 28 |\n| `scripts/classify_test_failures.py` | 62.9% | 37 |\n| `scripts/ledger_validate.py` | 65.3% | 63 |\n| `scripts/mypy_return_autofix.py` | 82.6% | 11 |\n| `scripts/ledger_migrate_base.py` | 85.5% | 13 |\n| `scripts/fix_cosmetic_aggregate.py` | 92.3% | 1 |\n| `scripts/coverage_history_append.py` | 92.8% | 2 |\n| `scripts/workflow_validator.py` | 93.3% | 4 |\n| `scripts/update_autofix_expectations.py` | 93.9% | 1 |\n| `scripts/pr_metrics_tracker.py` | 95.7% | 3 |\n| `scripts/generate_residual_trend.py` | 96.6% | 1 |\n| `scripts/build_autofix_pr_comment.py` | 97.0% | 2 |\n| `scripts/aggregate_agent_metrics.py` | 97.2% | 0 |\n| `scripts/fix_numpy_asserts.py` | 98.1% | 0 |\n| `scripts/sync_test_dependencies.py` | 98.3% | 1 |\n\n_Updated automatically; will refresh on subsequent CI/Docker completions._\n\n\n---\n### Keepalive checklist\n\n#### Scope\n```markdown\n## Why\nPR #894 addressed issue #893 but verification identified concerns (verdict: **Unknown**). This follow-up addresses the remaining gaps with improved task structure to ensure compliance with the rewritten acceptance criteria.\n\n## Tasks\n\n\n## Context for Agent\n\n### Related Issues/PRs\n- [#895](https://github.com/stranske/Workflows/issues/895)\n- [#894](https://github.com/stranske/Workflows/issues/894)\n- [#893](https://github.com/stranske/Workflows/issues/893)\n\n### References\n- https://github.com/stranske/Workflows/compare/main...codex/issue-895?expand=1\n\n\n#### Tasks\n- [ ] Update the `agents-auto-pilot.yml` workflow file to include steps that call the metrics collector and timer utilities.\n- [ ] Enhance the metrics collector script by adding aggregation logic to generate summary metrics reports and support CLI output.\n- [ ] Modify the failure handling within the collector and timer utilities to capture a richer set of contextual details.\n- [ ] Implement redaction/sanitization safeguards in the metrics collection process.\n- [ ] Update documentation to clearly explain how to interpret the metrics outputs.\n\n#### Acceptance criteria\n- [ ] The `agents-auto-pilot.yml` workflow file includes explicit steps that invoke the metrics collector and step timer utilities.\n- [ ] The metrics collector script generates a summary metrics report and supports CLI output.\n- [ ] Failure handling in the metrics collector and timer utilities captures exit codes, step names, error categories, and environment details.\n- [ ] The metrics collection process includes redaction/sanitization safeguards to prevent logging sensitive information.\n- [ ] The `metrics_collection.md` documentation clearly explains how to interpret the metrics outputs, including examples.","\n> **Source:** Issue #895\n\n\n\n\n## Automated Status Summary\n#### Scope\n```markdown\n## Why\nPR #894 addressed issue #893 but verification identified concerns (verdict: **Unknown**). This follow-up addresses the remaining gaps with improved task structure to ensure compliance with the rewritten acceptance criteria.\n\n## Tasks\n\n\n## Context for Agent\n\n### Related Issues/PRs\n- [#895](https://github.com/stranske/Workflows/issues/895)\n- [#894](https://github.com/stranske/Workflows/issues/894)\n- [#893](https://github.com/stranske/Workflows/issues/893)\n\n### References\n- https://github.com/stranske/Workflows/compare/main...codex/issue-895?expand=1\n\n\n#### Tasks\n- [ ] Update the `agents-auto-pilot.yml` workflow file to include steps that call the metrics collector and timer utilities.\n- [ ] Enhance the metrics collector script by adding aggregation logic to generate summary metrics reports and support CLI output.\n- [ ] Modify the failure handling within the collector and timer utilities to capture a richer set of contextual details.\n- [ ] Implement redaction/sanitization safeguards in the metrics collection process.\n- [ ] Update documentation to clearly explain how to interpret the metrics outputs.\n\n#### Acceptance criteria\n- [ ] The `agents-auto-pilot.yml` workflow file includes explicit steps that invoke the metrics collector and step timer utilities.\n- [ ] The metrics collector script generates a summary metrics report and supports CLI output.\n- [ ] Failure handling in the metrics collector and timer utilities captures exit codes, step names, error categories, and environment details.\n- [ ] The metrics collection process includes redaction/sanitization safeguards to prevent logging sensitive information.\n- [ ] The `metrics_collection.md` documentation clearly explains how to interpret the metrics outputs, including examples.\n\n**Head SHA:** a6d0b83ced3eb82785d0a9e9bb627d6ed2929191\n**Latest Runs:** ✅ success — Gate\n**Required:** gate: ✅ success\n\n| Workflow / Job | Result | Logs |\n|----------------|--------|------|\n| Agents PR meta manager | ❔ in progress | [View run](https://github.com/stranske/Workflows/actions/runs/21082795565) |\n| CI Autofix Loop | ✅ success | [View run](https://github.com/stranske/Workflows/actions/runs/21082726918) |\n| Gate | ✅ success | [View run](https://github.com/stranske/Workflows/actions/runs/21082726911) |\n| Health 40 Sweep | ✅ success | [View run](https://github.com/stranske/Workflows/actions/runs/21082726894) |\n| Health 44 Gate Branch Protection | ✅ success | [View run](https://github.com/stranske/Workflows/actions/runs/21082726898) |\n| Health 45 Agents Guard | ✅ success | [View run](https://github.com/stranske/Workflows/actions/runs/21082726881) |\n| Health 50 Security Scan | ✅ success | [View run](https://github.com/stranske/Workflows/actions/runs/21082726903) |\n| Maint 52 Validate Workflows | ✅ success | [View run](https://github.com/stranske/Workflows/actions/runs/21082726906) |\n| PR 11 - Minimal invariant CI | ✅ success | [View run](https://github.com/stranske/Workflows/actions/runs/21082726914) |\n| Selftest CI | ✅ success | [View run](https://github.com/stranske/Workflows/actions/runs/21082726915) |\n| Validate Sync Manifest | ✅ success | [View run](https://github.com/stranske/Workflows/actions/runs/21082726927) |\n","base_ref","head_ref","pull_request_info",[665],{"_603":57,"_57":666},"@codex fix 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