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verify:pr-local`\n - Partial due repository coordinator contention: runtime, installed-lock parity, changed-file formatting, and lint passed; admission was then denied while another worktree held focused-test capacity.\n- [x] `npm run format` — passed twice, including the final committed ledger state.\n- [x] `npm run check:design-system-contract` — passed.\n- [x] `npm run typecheck` — passed; the final isolated production build also completed TypeScript validation.\n- [x] Focused Vitest — 41/41 passed (`answer-progress.test.ts` 8/8; `tailwind-merge-config.test.ts` 33/33).\n- [x] Focused Chromium answer-progress journeys — expanded timing, compact follow-up timing, error cleanup, reduced motion, and forced colours passed. The compact journey was rerun 1/1 after explicitly selecting normal-motion media; the preceding full run's other 3 journeys passed.\n- [x] Isolated production build — passed, including TypeScript and 1,710 generated pages.\n- [x] `npm run eval:rag:offline` — fixture and manifest validation passed (36 golden cases, 23 suites); the command then exited nonzero because its follow-up Vitest admission was denied by another worktree's Playwright lease.\n- [ ] `npm test`\n - Ran once. Broad suite reported 25 unrelated Windows/harness failures, dominated by missing POSIX `ln`/Bash exit 127, temporary-directory EPERM cleanup, and hosted-Linux provenance fixtures. The focused changed-owner suites remained green.\n- [ ] `npm run check:production-readiness`\n - Ran and failed closed in the isolated worktree because Supabase/OpenAI credentials are intentionally absent. Node 24 and the query-hash boot guard passed; no provider call was made.\n- UI verification not run: the full `verify:ui` gate was not stacked after focused changed-owner Chromium proof.\n- Release verification not run: this PR is not a release or deployment.\n- Live retrieval/answer evals not run: retrieval, synthesis, prompts, citations, and answer payloads are unchanged.\n\n## Risk and rollout\n\n- Risk: Low. Animation-only CSS/SVG timing change. Residual visual/compositor risk remains on physical iOS Safari and installed PWA because local Chromium cannot prove those environments.\n- Rollback: Revert commits `55347084da56f7888b57f7811007b2146e60abe9` and `6a8f940f3a1a2521b17e52f85218755e43046269`.\n- Provider or production effects: GitHub branch and this PR only. No deployment, production mutation, clinical data access, or model/provider request.\n\n## Clinical Governance Preflight\n\n- [x] Source-backed claims still require linked source verification before clinical use\n- [x] No patient-identifiable document workflow was introduced or expanded without explicit governance approval\n- [x] Supabase target remains `Clinical KB Database` (`sjrfecxgysukkwxsowpy`)\n- [x] Service-role keys and private document access remain server-only\n- [x] Demo/synthetic content remains clearly separated from real clinical sources\n- [x] Source metadata, review status, and outdated/unknown-source behavior remain conservative\n- [x] Deployment classification/TGA SaMD impact was checked; clinical decision-support behavior is unchanged\n\n## Notes\n\n- Final scoped review found no P0–P3 defect.\n- The branch is 47 commits behind the refreshed remote base, but a read-only merge-tree check confirmed a clean merge. 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For P2 and lower findings, fix only clear, scoped, low-risk issues; otherwise disposition them with a concise reason. For a fixed thread, reply with followed by . For a no-code disposition, use followed by . A local-only commit is not a fix. If publication or verification fails, use neither result marker, do not claim success, and leave the thread open with the blocker. Finish only after every actionable thread is fixed or dispositioned and closed, or explicitly left open for a human decision. Do not update the branch from main, address unrelated reviews, broaden scope, or create more than one scoped fix commit. Do not use external APIs, paid services, credentials, dependency changes, or broad refactors unless explicitly authorized. Add targeted tests where behavior changes and run the narrowest relevant validation.`\n1054: Git publishing still require the explicit authorization defined above.\n1075:- For an explicitly authorised GitHub task, use the authenticated GitHub connector/MCP\n1082:- In Codex Cloud, use native Push, the authenticated GitHub connector, or GitHub's UI for branch\n1087: connector path is unavailable, report the platform limit rather than copying a PAT into a\n","input_text","Script completed\nWall time 0.1 seconds\nOutput:\n",{"_450":470,"_432":471,"_411":412,"_434":418},1786551533257,{"_472":466,"_473":474,"_475":476,"_477":478,"_416":35,"_479":35,"_45":480,"_481":482,"_483":484,"_425":116,"_95":485},"aggregatedOutput","command","/bin/bash -lc \"rg -n 'authenticated GitHub connector|Missing .*gh.*|platform limit|Git publishing still require|pr-ci-fix' AGENTS.md\"","commandActions",[486],"cwd","/workspace/Database","exitCode","exec-472001a2-4d85-4f37-a67f-e324b1bb031e","processId","13408","source","unifiedExecStartup","commandExecution",{"_473":487,"_167":488,"_489":490,"_95":491},"rg -n 'authenticated GitHub connector|Missing .*gh.*|platform limit|Git publishing still require|pr-ci-fix' AGENTS.md","AGENTS.md","query","authenticated GitHub connector|Missing .*gh.*|platform limit|Git publishing still require|pr-ci-fix","search",{"_432":493,"_411":412,"_434":418},{"_456":457,"_45":494,"_495":496,"_439":497,"_194":498,"_499":-5,"_425":116,"_95":500},"ctc_0b6c0fd24415bb66016a7c9cec4cf48195b16c09a49a508401","input","const r = await tools.exec_command({cmd:\"rg -n 'authenticated GitHub connector|Missing .*gh.*|platform limit|Git publishing still require|pr-ci-fix' AGENTS.md\",\"workdir\":\"/workspace/Database\",\"yield_time_ms\":10000,\"max_output_tokens\":3000}); text(r.output);\n",{"_444":418},"exec","namespace","custom_tool_call",{"_432":502,"_411":412,"_434":418},{"_435":-5,"_503":504,"_45":505,"_439":506,"_507":508,"_95":509},"encrypted_content","gAAAAABqfJzs6b1qFMNfQ4wPa1jvF0u6PrbZ2txqJmVDlaujS7mskxd2ar1I7hnsW9ILOxgoJXK9li7Rd7pebp8GCWQLW732UsAkBfAgK1FUanaKxsCHb8hmWd17HC88yEMXMXsYQgnGR3s1TtXu_AE4gVvhKicoPTMeatK3bQbGxEOoJIOEFlZvDPPys52FfxDr7LB1jc7wsqvvrnHbULkKRwe5-_5E80SYVR1SuBzAYE5EBlEl5M1lO63NIDciMoqlxw-We0zSUak_FmGHlbYn0i25rUPcRNI8yL-4z0lRLRBLRGnN2cPlVzWlJ8uEffTKYETRVfp3PzbPQCdQZIFvt1TQGl_H_5YaIjw3k5Nkp_meOATtBNSc5c7bKtNQZRFiUVmhkvaQxVvKFpskLbuoi4OhihJsMHC8DUY96BUIg2C7oR-4CIVmYmC4_Yfn61QMnji1yJM_-qggMVT5q7KdjwdUWVW84AYia3u9RlJyzeOUU2ilHePZ_GtcO_PFT8dgvghlb2EwiX4jze_CXU2yb_gfmDkBOekmcJCCbPsbrQ08xTGmznwigHxpsmwSebp-owf84hHm8laId-dg1jEomNcBZ4NyF7bmkh10y3vBBWT9u-QiGHos-mZPga1ovdBJgqSNdCw-4y_i94E-L0lJM_0nGW9o_y07QMwzZZRjb6vFneVtJ5lxlzfCr1m8T71CTHm5J3vLmvzPbe6yPqFD5h7tuPI5t919lXH8GffbW5qal72bq79ox2QnNSMGsXnw0cp0floTtXMQOSIqCpsMZobqXjIPYqW60tArnzhj1O5GdxTTtWZRzEZAIIxePVywwT5KUiluFMe4K0vTXlTop35ZEAmcIUp1Z_ZCnfu79933ekw0QcAzliDG2tzQnGtkiFgW2owoWcevPGS64fPth5dvriqzILMZghFS78aLQu0F6xOxQ0c9eaucHShFE9QcKGZ4eT0e4N0mm1gTSXCaTDf-q8dgOem9PnGAyOU17PAw7GwDi1YNUdhIKGp-Qlarv1tz37-B","rs_0b6c0fd24415bb66016a7c9ceb5374819595fcf7669cf181c3",{"_444":418},"summary",[510],"reasoning",{"_49":511,"_95":512},"**Fixing command substitution quoting**","summary_text",{"_450":514,"_432":515,"_411":412,"_434":418},1786551532367,{"_435":516,"_45":505,"_507":517,"_95":509},[],[511],{"_450":519,"_432":520,"_411":412,"_434":418},1786551529678,{"_472":521,"_473":522,"_475":523,"_477":478,"_416":524,"_479":35,"_45":525,"_481":526,"_483":484,"_425":116,"_95":485},"rg: the literal \"\\n\" is not allowed in a regex\n\nConsider enabling multiline mode with the --multiline flag (or -U for short).\nWhen multiline mode is enabled, new line characters can be matched.\n## work\n55347084da56f7888b57f7811007b2146e60abe9\n","/bin/bash -lc 'rg -n \"authenticated GitHub connector|Missing `gh`|platform limit|Git publishing still require|pr-ci-fix\" AGENTS.md; git status --short --branch; git rev-parse HEAD'",[527],207,"exec-158b14e4-1e2e-42e7-b972-15243e029bc7","49418",{"_473":528,"_95":529},"rg -n \"authenticated GitHub connector|Missing `gh`|platform limit|Git publishing still require|pr-ci-fix\" AGENTS.md; git status --short --branch; git rev-parse HEAD","unknown",{"_432":531,"_411":412,"_434":418},{"_456":532,"_45":-5,"_439":533,"_194":-5,"_459":534,"_95":461},"call_Zfuhh2XuRFqEt4mdjChSCeq4",{"_444":418},{"_346":535,"_463":-5},[536,537],{"_49":538,"_95":467},{"_49":521,"_95":467},"Script completed\nWall time 0.3 seconds\nOutput:\n",{"_432":540,"_411":412,"_434":418},{"_456":532,"_45":541,"_495":542,"_439":543,"_194":498,"_499":-5,"_425":116,"_95":500},"ctc_0b6c0fd24415bb66016a7c9ce884b88195bd657f250e73db64","const r = await tools.exec_command({cmd:\"rg -n \\\"authenticated GitHub connector|Missing `gh`|platform limit|Git publishing still require|pr-ci-fix\\\" AGENTS.md; git status --short --branch; git rev-parse HEAD\",\"workdir\":\"/workspace/Database\",\"yield_time_ms\":10000,\"max_output_tokens\":3000}); text(r.output);\n",{"_444":418},{"_432":545,"_411":412,"_434":418},{"_435":-5,"_503":546,"_45":547,"_439":548,"_507":549,"_95":509},"gAAAAABqfJzoWDCn99yEreI3RDJVlOUHpiRZ8coA2HWWID11ieiFOWOjrJjsd9-TG2-nMxOKr43kTCwGMbyXUlO13e5PCnes_WJ2Q8wwrbwcMLimOtwbQgmVXXfIBkeS-VxYvHxjhnVIZfEOIW9FKfqaWOWMIAxwRbZQg0LhfCTZx_uDSFzX1hLBBeXfIRMOZXLUm2Dpq2m7r0t37QL4RxudY8OmtxRlTPNg_R_P86XfZlveDAP86leRElIK453mOJ3-9FQm61kqjMcsi1OaRXKpFxgFi7keMb5_tQCxtqMewzx0vq528xFl4WiWQmmeF2HAEsYj_K65yfZyNefOqK3FLr3eIYYhnTpN4X02dVR7ohvuEaWqRjDAUfckuc0QPu1rjeIJqGo6ZMoFFClS7QLxESH7KoVHBL05DoLFv9Cq3KTKopkspXS_pXSSCaC5VZ1SoDFbU3SloRJisWkVAZuolATiu_xFYhjSI19eP3zoYGcMXy8Eyr-zpIrzSK39Jz_KDpB6zCHtbgJdDD2wzV5I50BIZxQOBJSbvc0ZUjUGdLUfMqgIBwSbvJPQwYP10_sIogMGNoif1o57ygE9HGMdyrJ2J6RRmKffXSnJThkuzrP2NQ2pxHfbqr1Qf4nHreFC6QlNDpzsFC1E4V9cGuA_AktxsWXgtkvnzDMOfFCxCI9Ek4DMJN0xWVAxx_aat_X7Bxfy_lcex36yFrib8sOU8JfAams7YJKliGAbOhoUBd4HOb0EUBfuLhvE_N4ZLTiYpE-GcN9yx6v_OpSmmCKaxwzT0TH5Vkw9ofjGNCwxDxBo5F8wjOxQ15AR1XNQZG1La0TatyQKwX1myVv_mmpOWG0IbDSEUBlYPb4ckEbMsfBdrx1DLaJq_MdMTVe9F5C2g8_qaqvJt16_Dms6OShhLJFUYda53Bg30gLayInxtwgz4BDC7Dc4MNpbYfRzcI1iZ-dxHbwrsnK9ZzSkTuhbrOCk6ISaFEZjDZtzt6LpRTXW6UfrBl4sTuT-11Ef2dlnETdlNuBaWMKxz8E3VAfsJjfRN1XiBeJGMtQ14pF55-Zv8SmuRuZmnfEGQ661Z6oCGoJdqrfEPJ282OMf8ObRTuBxDeHt5knwu5y-ZtN8xAjw3aYFe49rsgWcsAy12NFFo6pCegrdi_HybCEGQC_5Z3t8DmF65BrlmeLJjNsAlpKcDOAY16CLSEPGA5s2bIROw5Bg9WTSLAIfJYFqkHGccMTQ_CeN3E99DoAeVSNJ4md1VM44P7AV2IezsXHK7qGPWWWNJKceTMBMC9npKDHqb41wAppUPKoXufoWJ8pce6x_iJZCJxWOzQWGt4wFiYdMSYLlARS4jvUgOxqXXhdNMPsXGHxsiiivM2utO85B-XZK2fTOKVVrCd85LU7vmWx6Y2TqUFStbp19GOV8NGxkYI4zvqic5a2M89vd5yLUYWLc6GgvRBoCO-uexd0wqfHnqX1s8JNIOb9LVBva0hPGyyw_jdLMYQp3PfEZDAbo9XdrjE89eyt81u-5-Z083GKMBeuMq5-wzbQALKRe0QyMoIa0YSL_bdjNRaDictzzPQaFIaT8NgndvQ1T7ZEHRt_YW9bcp0xaYuBue2Ja3g9g4kq74UEQP_ZPJ7fW3IV8YZsljR_ViHynBUBqNfDujLZpuI78GrIpYujHuUeeojf3fwLRA8c_t5heQWUPbUZXGEtaAIejh43nW-2AKcu6fvNijRZwwsrz67SDsqsBoETY0rSUBUqmfTRSNblaSRFtmUM8PMNLYdT_A2eLHH97sT7KXHYmEXzT7soPzwHybdB8qioxksIczI0xgvIboD4ejzyqmWY_9u03wWfU3bGXKG8g9e3Ng37kE1mFA2bdRjI8jJCmzMQy21y5CIwwbOLUNlHuZnbvXGQDvhM-R7O8t4qN1QV5Cr2HkkvJcI2MNWcew5DhaDrdwzHrHwECWKLKjgRR4Q6nvDDU1XmVXaWrjrFQzeokc_jSBRJqC8HH7qrPOy0b-qj4og==","rs_0b6c0fd24415bb66016a7c9ce4da048195a402d11bac8a9273",{"_444":418},[550,551],{"_49":553,"_95":512},{"_49":552,"_95":512},"**Locating root instruction line numbers for citations**","**Confirming no commit due to missing GitHub write access**",{"_450":555,"_432":556,"_411":412,"_434":418},1786551528515,{"_435":557,"_45":547,"_507":558,"_95":509},[],[553,552],{"_450":560,"_432":561,"_411":412,"_434":418},1786551523994,{"_472":562,"_473":563,"_475":564,"_477":478,"_416":565,"_479":35,"_45":566,"_481":567,"_483":484,"_425":116,"_95":485},"You are not logged into any GitHub hosts. To log in, run: gh auth login\n\n-- current pr --\nTo get started with GitHub CLI, please run: gh auth login\nAlternatively, populate the GH_TOKEN environment variable with a GitHub API authentication token.\n","/bin/bash -lc \"cat AGENTS.md; printf '\\\\n-- task skill --\\\\n'; sed -n '1,240p' .agents/skills/task/SKILL.md; printf '\\\\n-- release skill --\\\\n'; sed -n '1,220p' .agents/skills/release/SKILL.md; printf '\\\\n-- gh auth --\\\\n'; gh auth status; printf '\\\\n-- current pr --\\\\n'; gh pr status --json currentBranch 2>&1 || true\"",[568],367,"exec-87deb12b-4034-4e25-a012-86f0f47ef7f1","65322",{"_473":569,"_95":529},"cat AGENTS.md; printf '\\n-- task skill --\\n'; sed -n '1,240p' .agents/skills/task/SKILL.md; printf '\\n-- release skill --\\n'; sed -n '1,220p' .agents/skills/release/SKILL.md; printf '\\n-- gh auth --\\n'; gh auth status; printf '\\n-- current pr --\\n'; gh pr status --json currentBranch 2>&1 || true",{"_432":571,"_411":412,"_434":418},{"_456":572,"_45":-5,"_439":573,"_194":-5,"_459":574,"_95":461},"call_I64Y75EO6Z4jdPREMyLDxsrL",{"_444":418},{"_346":575,"_463":-5},[576,577],{"_49":579,"_95":467},{"_49":578,"_95":467},"Warning: truncated output (original token count: 24743)\nTotal output lines: 1152\n\n\n\n# This is NOT the Next.js you know\n\nThis version has breaking changes — APIs, conventions, and file structure may all differ from your training data. Read the relevant guide in `node_modules/next/dist/docs/` (resolved from this file's directory; in monorepos the `next` package may not be visible from the repo root) before writing any code. Heed deprecation notices.\n\nThis block is written and re-added by `next dev` — verify at `node_modules/next/dist/server/lib/generate-agent-files.js`. Removing it from a diff only re-creates the uncommitted change; committing it with your work keeps the tree clean.\n\n\n\n\n\n## Dependency shortcut\n\nWhen the user types exactly `dependency` as the entire task message, after trimming surrounding whitespace, treat it as a shortcut for safe dependency maintenance. This is a Codex chat shortcut, not an app feature, script, automation, or CI workflow.\n\nGoal:\nUpdate direct project dependencies to the newest stable compatible versions, regenerate the existing lockfile, identify source/config/test code that relies on old dependency behavior, make the smallest safe compatibility changes, and verify the result. Do not rewrite the project, switch package managers, discard user work, commit, push, deploy, or run destructive cleanup without explicit confirmation.\n\nStart with read-only inspection:\n\n- Check branch, upstream, worktrees, recent relevant history, and `git status`.\n- If on `main`, `master`, `develop`, `release/*`, or another protected/base branch, create/switch to `codex/dependency-maintenance` before editing, if safe.\n- Inspect manifests, lockfiles, package-manager config, runtime/toolchain files, workspace layout, CI config, scripts, and documented checks.\n- Detect repo-local install/dev/test/build/watch/server processes that could race dependency updates.\n- Preserve all existing staged, unstaged, and untracked user work.\n\nPackage-manager rules:\n\n- Use the package manager already used by the repo: npm, pnpm, yarn, bun, pip, poetry, uv, cargo, go, bundler, gradle, maven, dotnet, or equivalent.\n- Do not switch package managers or create a new lockfile type.\n- Respect engines, runtime versions, lockfiles, workspaces, wrappers, and repo conventions.\n- In monorepos or polyglot repos, update each ecosystem through its native workspace-aware workflow.\n\nDependency update rules:\n\n- Identify outdated direct production and development dependencies.\n- Compare both manifest ranges and locked/installed versions against latest stable compatible releases.\n- Treat “outdated packages found” exit codes as normal where applicable.\n- Avoid prerelease, alpha, beta, canary, rc, next, nightly, and experimental versions unless the stable channel points there and explain why.\n- Do not use force or legacy flags that bypass peer, engine, resolver, or lockfile integrity checks unless explicitly approved.\n- Do not run forced audit fixes or broad destructive codemods.\n- If latest is incompatible, use the newest compatible version and document why.\n- Group risky updates coherently, such as framework plus plugins, test runner plus coverage, lint core plus plugins, or runtime plus adapter packages.\n\nCompatibility audit:\n\n- For every major update and every core framework/runtime/build/test/lint/UI/database update, inspect release notes, migration guides, peer ranges, engines, and changelogs when available.\n- Search source, tests, scripts, config, and CI for imports, APIs, CLI flags, config keys, environment variables, plugin names, generated types, or file paths tied to changed dependencies.\n- If old dependency behavior is used, make the smallest safe migration that preserves behavior.\n- If migration is large, risky, architectural, or product-affecting, stop after discovery and provide a concrete fix plan with affected files, package versions, sequence, and verification commands.\n- Add or adjust focused tests only when needed to prove migrated behavior.\n\nGenerated and sensitive files:\n\n- Do not intentionally keep dependency directories, build outputs, caches, logs, local state, test artifacts, browser artifacts, `.env*`, secrets, keys, tokens, credentials, or machine-local config.\n- Manifest and existing lockfile changes are allowed.\n\nVerification:\n\n- Run a cheap baseline first when useful to distinguish pre-existing failures.\n- After updates, run install/dependency validation, then relevant lint, type check, tests, build, smoke/UI/a11y, codegen, integration checks, or equivalent.\n- For frontend/browser-facing changes, run browser/UI verification when framework, bundler, router, styling, test runner, or browser automation changed.\n- If a check fails, fix dependency-related breakage and rerun the smallest failing check before broader checks.\n- Run non-mutating audit/vulnerability checks when available.\n- Confirm no repo-owned dev server, watcher, or temporary process was left running unless requested.\n\nFinal response for `dependency` must include:\n\n- Branch and worktree state.\n- Package manager, runtime, manifests, and lockfiles detected.\n- Outdated dependencies found.\n- Dependencies updated, old version -> new version.\n- Dependencies not updated and why.\n- Files changed.\n- Compatibility migrations and old APIs found/fixed.\n- Checks run and results.\n- Checks not run and why.\n- Audit/vulnerability summary.\n- Generated/untracked files left behind.\n- Branch movement, external repo changes, or process cleanup observed.\n- Risks or follow-up work.\n- Confirmation that no commit or push was made unless explicitly requested.\n\nAfter setup:\n\n- Verify root `AGENTS.md` contains exactly one `## Dependency shortcut` section.\n- Show the final diff for `AGENTS.md`.\n- Summarize what changed.\n- Confirm no dependency update, install, test, build, audit, commit, or push was performed.\n\n\n\n\n\n## Bug-hunter shortcut\n\nWhen the user types exactly `bug-hunter` as the entire task message, after trimming surrounding whitespace, treat it as a shortcut for targeted defect discovery.\n\nExecution rules:\n\n- Invoke the `bug-hunter` skill first.\n- Prioritize reproducible defects over code style, naming, or formatting feedback.\n- Trace realistic failure paths: invalid input, empty states, retries, race/concurrency issues, stale state/cache, network/auth failures, permissions, and boundary values.\n- For each finding, include trigger, expected behavior, actual risk, and the smallest proof (or targeted test/check) that would catch it.\n- If no high-confidence defect is found, explicitly state that and list the most likely residual risk area.\n\nScope and safety:\n\n- Keep the hunt scoped to code touched by the user request unless the defect clearly crosses module boundaries.\n- Do not make broad refactors while hunting; propose minimal fixes for confirmed issues.\n- Run the smallest focused verification for each confirmed defect, then expand only if needed.\n\n\n\n\n\n## Codex review throttling and routing\n\nDo not review branches opportunistically. Review the current changed diff, PR, or branch only when the user explicitly asks for review/audit/hunter/cleanup/upload work, when CI/check failures are the task, or when the current change touches high-risk areas that require a targeted review before handoff.\n\nUse `docs/codex-review-protocol.md` as the shared review protocol for every repo-local review skill, branch/PR review, audit, bug hunt, release-readiness check, and PR/CI review.\n\nBefore reviewing a branch or PR:\n\n- Run `npm run ledger:lookup -- --scope \"\"`. It resolves the HEAD, matches the abbreviated SHAs older records used, and prints an explicit verdict. Do not read `docs/branch-review-ledger.md` by eye — live + archive rows are many, and eyeballing is how repeat reviews slipped through. `ledger:lookup` reads archives under `docs/archive/branch-review-ledger-*.md` too.\n- On `ALREADY REVIEWED`, summarize the prior ledger outcome and skip the repeat review unless the user explicitly requests a fresh pass.\n- On `NOT REVIEWED at this HEAD`, review only the changed scope and append a record after the review.\n\nBefore reviewing multiple branches:\n\n- Build a short branch inventory first: branch, upstream, ahead/behind, last commit, and merged status.\n- Skip branches already merged into `main`.\n- Skip unchanged branches already recorded in `docs/branch-review-ledger.md`.\n- Do not re-review every branch after ordinary coding tasks.\n- If a repeated request targets unchanged reviewed branches, summarize the prior result and ask before doing another full pass.\n\nReview routing:\n\n- `diff-review`: Use for explicit review of the current diff, PR, or named branch. Findings first, ordered by severity, with file/line evidence.\n- `bug-hunter`: Use only for the exact `bug-hunter` shortcut or an explicit defect-hunt request. Prioritize reproducible bugs and smallest proof.\n- `repo-auditor`: Use for explicit repo-wide audit/refactor/dead-code/import/dependency-structure requests. Treat outputs as triage, not automatic delete lists.\n- `release-readiness`: Use for explicit release, merge, PR readiness, or handoff confidence requests. Do not run provider-backed gates without confirmation.\n- `branch-cleanup`: Use only when the prompt explicitly asks for branch cleanup/hygiene or branch deletion candidates. Apply `docs/branch-cleanup-guide.md` and the review ledger before inspecting branch diffs.\n- `pr-ci-fix`: Confirmation-required for this repo. GitHub/GitLab API calls, PR comments, CI reruns, commits, and pushes require explicit user approval and must respect the upload/handoff rules. Exception: an explicit `Run PR` sweep carries this approval (see \"## Run PR shortcut\").\n\nWhen a branch or PR review completes, record it with `npm run ledger:append -- --ref --head --scope --outcome --checks `. Never hand-write the markdown row: hand-written rows produced the mojibake, wrong-width, and duplicate records that the 2026-07-28 hygiene pass had to repair, and `see PR head` or abbreviated HEADs make a record unmatchable so the review runs again. The ledger is append-only: never edit or delete an existing record; append a correction or superseding record (`--supersede`) instead. Its `merge=ledger` driver preserves concurrent appends and drops exact duplicate rows; after a main sync without that driver installed, run `npm run ledger:dedupe`. `npm run check:branch-review-ledger` blocks conflict markers, duplicate records, mojibake, wrong-width or heading-style records, unresolvable HEADs, or loss of that merge protection.\n\nBabysit / Run PR ledger policy: do not push a tip whose sole delta is a babysit ledger append (that marks every other open PR behind). One Run PR row per PR per sweep; on a later sweep of the same PR, pass `--supersede` rather than stacking another \"main sync\" row. After `git merge origin/main`, run `npm run ledger:dedupe` before committing when the ledger changed.\n\n\n\n\n\n# Local server safety\n\n- If the user says `run`, execute `npm run ensure` and return the printed URL.\n- If the user asks for UI/frontend changes, browser QA, screenshots, mobile checks, or a local app link, run `npm run ensure` before opening or testing the app, even if the user did not say `run`.\n- Never assume `localhost:3000`, `localhost:3001`, or `localhost:3002`.\n- Never attach to a local server unless `/api/local-project-id` confirms it is this project.\n- Do not kill or modify other projects' local servers. If the stable project port is busy, let `npm run ensure` choose the next safe project URL.\n- Do not run a permanent watcher. Only start or verify the server when the current chat task needs the app or the user asks to run it.\n\n\n\n\n\n# Codex Desktop worktree setup\n\n- The Windows Codex Desktop environment setup command is `node scripts/setup-codex-worktree.mjs`.\n It must work before `node_modules` exists, validate Node 24/npm 11, reuse only a complete\n byte-identical local installation, and otherwise run the locked npm install.\n- Never configure Windows Desktop worktrees to run `bash scripts/setup-codex-cloud.sh`. That script\n is Linux/Cloud-only; Windows launches it through WSL outside the worktree and cannot provision the\n repository.\n- `.codex/environments/environment.toml` is autogenerated and ignored. Change the Database\n environment through Codex settings, then verify the effective command with the generated file and\n `node scripts/setup-codex-worktree.mjs --dry-run`.\n\n\n\n\n\n# Reasoning effort calibration\n\nReasoning effort is a budget in the same way verification is a budget, and it is misspent the same\nway — by defaulting to the maximum instead of matching the spend to the risk. **Scale effort to how\nexpensive the mistake is to undo (irreversibility × branching factor), never to the phase label.**\n\"Plan high, build lower\" is a good default, not a rule; it is wrong often enough that it must be\nchosen deliberately rather than assumed.\n\n**Why it is a good default.** Planning errors compound and implementation errors stay local: a wrong\napproach throws away the build, a wrong identifier is one edit. A plan is also a few thousand output\ntokens against a build's many long turns, so effort is cheapest exactly where it has the most leverage.\n\n**The mechanism that makes it work — do not skip this part.** A lower-effort build only succeeds\nagainst a plan concrete enough to execute: named files, named symbols, ordered steps, and the gate\nthat will prove it. Downgrading the build against a vague plan does not save effort, it relocates the\nthinking into the expensive phase. If the plan cannot name those things, the build is not eligible for\nthe downgrade.\n\n| Situation | Plan | Build |\n| ---------------------------------------------------------------------------------------------- | ----------- | ----------- |\n| Architecture, Supabase migrations/RLS, RAG ranking surfaces, auth/privacy, ingestion contracts | xhigh | high |\n| Ordinary feature or UI work with a clear shape | high | medium–high |\n| Mechanical and fully specified — ledger append, docs edit, rename (not dependency maintenance) | low or skip | medium |\n| Debugging an unknown failure | low | high |\n\n**Where the default inverts and the build needs more than the plan.** These are plan-light and\nexecution-heavy; treating them as plan-heavy spends the budget in the wrong place:\n\n- **Debugging.** The plan is \"find why X fails.\" The real reasoning is hypothesis-forming over local\n runtime, logs, and repro state during the build — hosted providers still need explicit confirmation.\n- **Constraint-dense implementation.** A one-sentence plan whose edit must simultaneously satisfy\n button wiring, design tokens, the one-composer rule, unlayered CSS, and the tap-target and\n phone-chrome contracts. Holding all of it at once is the hard part, not deciding what to do.\n- **Areas where training data is stale.** Next 16 is the standing case. Effort does not repair a wrong\n prior — reading `node_modules/next/dist/docs/` does. Raising effort instead of reading is itself the\n failure mode.\n\n**Constrain xhigh planning output, not just its effort.** Extra-high planning over-produces:\nalternatives, contingency branches, and surveys that are never used, paid for twice — once generating\nand once reading. Ask for the chosen approach, the files, and the gate, not a survey.\n\n**State the split before non-trivial planning work.** One line before starting: plan effort, build\neffort, and the risk that justifies them. It is cheap, it makes a wrong allocation visible while it is\nstill free to change, and it stops the blanket default from being applied silently.\n\n\n\n\n\n# Process hardening phases\n\n- **Verification principle:** run the smallest check capable of detecting a plausible regression introduced by the current diff. Before starting a check, identify the failure class it covers, whether a successful check already covered that class, whether a cheaper focused check offers comparable detection, and whether the incremental confidence justifies the runtime, resource use, and repository-lock contention. If there is no plausible changed failure path, do not run the check.\n\n| Tier | Use when | Default evidence |\n| ----------------------- | ----------------------------------------------------------------------------------------------------------------------------------- | -------------------------------------------------------------------------------------------------------------------- |\n| 0 — No test command | Explanation, planning, prompt writing, read-only inspection, or no repository change | No test, build, server, or baseline command |\n| 1 — Static/focused | Documentation, comments, metadata, or narrow non-behavioural configuration | Relevant format, docs, syntax, generated-file, or diff check only |\n| 2 — Focused behavioural | A localized helper, component, contract, or test change | Directly affected unit/DOM/contract test; add typecheck only when the edit can affect compilation or a type contract |\n| 3 — Domain gate | Shared UI/routing, dependencies, security, privacy, RAG, clinical output, production configuration, or another cross-cutting domain | The smallest applicable repository/domain selector, focused journey, or contract gate |\n| 4 — Broad handoff | The diff crosses multiple subsystems, cannot be bounded reliably, or the task explicitly requires PR/release confidence | One appropriate broad gate, selected rather than stacked by default |\n\n- Do not run a broad baseline routinely before localized work, and do not select `verify:cheap` merely because a change is described as “non-trivial.” Use `npm run verify:cheap` once when cross-module risk warrants a broad offline gate. Use `npm run verify:pr-local` when a change is ready for PR handoff: it now classifies the changed paths, runs focused documentation/workflow contracts for recognised low-risk scopes, and fails closed to lint, typecheck, the full unit suite, RAG fixture validation, and relevant build/domain gates for executable or unknown scope. If the diff has not changed, do not run `verify:cheap` first merely to repeat the same coverage.\n- Do not stack focused tests, full tests, typecheck, lint, build, and browser checks unless each catches a distinct plausible regression. Do not rerun an unchanged successful gate. A deliberately skipped low-yield broad gate is not automatically verification debt; report the skipped check and its risk-based reason concisely.\n- A fast-fail subset may precede a broader required gate only when the later gate excludes that subset for the same event; retain a fail-safe full path w…14743 tokens truncated…resolve request must fire only from a Codex-authored `pull_request_review` **submitted** event on an open pull request — never from the first inline comment mid-review. This guarantees the request is posted only after a code review completes; without a review there are no findings and the request is pointless.\n- The request job must skip reviews with no actionable findings: skip `approved`/`dismissed` reviews, and skip when the submitted review carries zero inline comments.\n- Route automatic repair only when at least one changed path is high-risk, when the pull request changes at least 10 non-test source files or 300 non-test source lines, or when the `codex-review` label explicitly opts in. Treat `skip-codex-review` as an unconditional opt-out that wins if both labels are present.\n- High-risk paths include migrations/RLS, application API routes, auth/permissions/privacy/security, clinical/RAG/retrieval/search/source/document behavior, provider or production configuration, dependencies, and CI/release workflows. Do not route docs-only, test-only, generated-only, or small low-risk UI/copy changes unless explicitly opted in.\n- Read changed-file metadata through the GitHub API only; never check out or execute pull-request code in the routing job. Record the selected route in a hidden `codex-autoresolve-route` marker for auditability.\n- Match the trusted Codex connector bot by exact login and bot type; do not use substring login checks.\n- Keep per-pull-request concurrency on the authorized job, not the whole workflow, so unrelated events cannot displace a pending Codex request.\n- Pin the supported Node 24-based `actions/github-script` release to its reviewed immutable commit SHA.\n- Post the `@codex` resolve request with a real (non-bot) user identity — a fine-grained PAT held in the `CODEX_TRIGGER_TOKEN` secret. The Codex connector ignores commands authored by `github-actions[bot]`, so a bot-authored request is silently dropped. The token needs `pull-requests: write` (issue-comment) access and no more.\n- The workflow must treat unmarked review-thread replies as inert. A trusted Codex reply beginning with `` may only resolve the exact containing thread, and a non-reply Codex review comment must never be turned into a new repair request.\n- The workflow must ask Codex to resolve only existing actionable Codex review findings for the triggering pull request and current head using these repository instructions; the resolve task must not perform a new review or create new findings. It must name the exact repository and PR head branch, require fixes to be published there through the authenticated GitHub connector, forbid detached `work` branches and stacked pull requests, and treat a local-only commit as a visible failure.\n- The workflow may request one automatic repair pass per pull request lifetime. Later heads require an explicit human request.\n- Only trust a pull-request deduplication marker when it was posted by the trigger-token account (the same identity that posts the request), resolved at runtime rather than hard-coded.\n- Permission failures while reading or creating pull-request comments must fail the workflow visibly, not return a successful soft-skip.\n- Grant `pull-requests: write` only to the narrow marker-driven thread-resolution job; the request job runs with read-only repository contents and relies on the trigger token's own scope, and neither job approves reviews or alters code.\n- The workflow must not run Codex directly with API credentials.\n- P0 and P1 findings should always be fixed.\n- P2 and lower findings should be fixed only when clear, scoped, low-risk, and testable; otherwise explain the decision and resolve or mark ready for human resolution.\n\n### Primary PR command\n\n`@codex resolve actionable Codex review findings for this pull request and current head using the repository instructions. This is the pull request's single automatic repair pass: do not perform a fresh review, create new standalone findings, or request another review. Work only the existing unresolved Codex threads on the current head. The workflow will provide the only allowed repository, pull-request head branch, and starting commit. Publish every approved fix to that exact head branch through the authenticated GitHub connector; never use a detached or synthetic work branch and never create a stacked pull request. Verify the pull-request head contains the pushed commit before reporting success. Always fix P0 and P1 findings. For P2 and lower findings, fix only clear, scoped, low-risk issues; otherwise disposition them with a concise reason. For a fixed thread, reply with followed by . For a no-code disposition, use followed by . A local-only commit is not a fix. If publication or verification fails, use neither result marker, do not claim success, and leave the thread open with the blocker. Finish only after every actionable thread is fixed or dispositioned and closed, or explicitly left open for a human decision. Do not update the branch from main, address unrelated reviews, broaden scope, or create more than one scoped fix commit. Do not use external APIs, paid services, credentials, dependency changes, or broad refactors unless explicitly authorized. Add targeted tests where behavior changes and run the narrowest relevant validation.`\n\n## Codex Cloud environment\n\nCodex Cloud uses an isolated Linux container and does not inherit desktop files,\ncredentials, OAuth sessions, MCP authentication, local services, or uncommitted work.\nUse `docs/codex-cloud.md` as the environment contract:\n\n- Configure setup as `bash scripts/setup-codex-cloud.sh && bash scripts/install-codex-cloud-command-shims.sh`.\n- Configure maintenance as `bash scripts/maintain-codex-cloud.sh && bash scripts/install-codex-cloud-command-shims.sh`.\n- Default to `CODEX_CLOUD_ACCESS_PROFILE=offline` for ordinary and protected RAG work.\n Use `connected` only when the user explicitly authorizes the required provider access.\n- When MCP tools are already callable in a Cloud session and the task needs them, use the host\n plugin/connector inventory. The production Supabase target is limited to prompted, read-only\n `docs` and `development` metadata tools; do not enable database, SQL, row, or log tools.\n Write-capable Figma, Railway, and Sentry tools still require explicit confirmation. Paid API\n canaries (`eval:rag`, `eval:retrieval:quality`, `eval:quality`, `verify:release`,\n `test:live`, `check:supabase-project`) still need explicit confirmation. Project\n `.codex/config.toml` keeps Desktop/CLI MCP entries `enabled = false` in git (`check:codex-cloud`\n fails if any tracked entry is enabled). Opt in locally via `$CODEX_HOME/config.toml` (preferred)\n or a never-committed project-file edit, then `codex mcp login railway`. Cloud setup never writes\n Railway or Supabase MCP registrations to `$CODEX_HOME`. Hosted ChatGPT/Codex requires an\n installed, workspace-authorized, OAuth-authenticated app, and a fresh task must prove the callable\n inventory with read-only identity calls. Root `.mcp.json` is a static cross-client template, not\n hosted runtime proof.\n- Cloud has no Windows task-start script. Report that exact fact, then perform equivalent\n read-only identity, branch, status, worktree, and Git-operation checks. Proceed only in a\n clean disposable checkout on a task-specific non-protected branch.\n- Cloud mirrors the tracked repository toolchain, not Windows files, `.env.local`,\n desktop plugins, browser sessions, OAuth sessions, user-global skills, or uncommitted\n work. Keep required workflows in tracked instructions, scripts, tests, and repo-local\n skills.\n- Repository setup cannot grant GitHub installation permissions, workspace RBAC, network\n policy, or provider credentials. Treat those as product/account settings and verify them\n separately without printing secret values.\n- In a fresh Cloud task, run `bash scripts/check-codex-cloud-raw-env.sh` before sourcing a\n profile or entering a login shell. It must report only provider variable names and presence,\n never values. Treat exit `1` / `FAIL`+`STOP` as a hard stop for any unexpected inherited name.\n Only exit `2` / `FAIL-KNOWN` for `OPENAI_BASE_URL` alone may use the restricted\n profile-and-shim continue path; do not generalize that allowance. Exit `2` is still a failed raw\n boundary — future automation must not treat non-1 as success or as a blind retry. That name can\n redirect OpenAI-bound traffic, so never invoke OpenAI clients from the raw parent or any binary\n that bypasses the profile/`node`/`npm`/`npx` scrub. Then run\n `npm run check:codex-cloud` directly; it must report the static-and-environment PASS line. Run\n `npm run check:codex-cloud -- --runtime` with `CODEX_CLOUD_EXPECTED_BASE_SHA` set to the\n intended merge/base commit when the checkout has only a task HEAD. Setup and maintenance may\n report freshness as unverified so provisioning remains repairable, but explicit acceptance must\n not pass an arbitrary HEAD. The command shims load the generated profile for normal `node`,\n `npm`, and `npx` work. Also run `npm run check:runtime` and\n `npm run check:installed-lock-parity` before trusting a new or reset environment. A skipped\n browser install is not full browser readiness. Output is limited to approved mode values,\n presence booleans, full Git commit identities, and MCP server/command/environment-variable\n names; never print credential values.\n- Do not add OpenAI, Supabase, Railway, GitHub, database, or user credentials as ordinary\n Cloud environment variables. Codex Cloud secrets are setup-only and unavailable to the\n agent phase unless the platform explicitly exposes a secret to the named task phase; do not\n copy them into files to bypass that boundary.\n- Provider-backed checks, hosted CI mutations, deployment, production data access, and\n Git publishing still require the explicit authorization defined above.\n- The ordinary offline Cloud profile intentionally cannot perform authenticated production or\n live-provider checks. `check:production-readiness` reports this as a provider capability gap.\n- Authenticated live tests run through the manual\n `.github/workflows/authenticated-live-tests.yml` GitHub Actions workflow, its explicit\n dispatch confirmation, and the `Database / production` environment, never by exposing\n credentials to the Codex Cloud agent shell.\n- The active hosted workspace is **Personal Pro**. Use Railway's installed official ChatGPT app\n with browser OAuth and **Allow read actions**; Personal Pro does not provide the dedicated-group\n RBAC or per-tool action disabling assumed by Enterprise/Edu instructions. Prove Railway with the\n callable tool inventory and a read-only identity/project-list call. Repository setup and local\n MCP config cannot activate it, and the Codex Cloud connector page currently offers no Railway\n connector. Use the documented split control plane: Codex Cloud for code and its native GitHub\n connector, ChatGPT web for Railway and project-scoped read-only Supabase. Every provider change\n still requires explicit approval. Enterprise/Edu custom-app controls are a future governance\n option, not the current workspace classification.\n CLI token auth is a separate operator capability: it requires a separately installed Railway CLI\n and a dedicated\n `RAILWAY_API_TOKEN`, and must never substitute `RAILWAY_TOKEN` or expose either token to an\n ordinary agent shell. GitHub connector access, GitHub CLI authentication, the credential-free\n `origin` URL, and shell Git authentication are separate capabilities.\n- For an explicitly authorised GitHub task, use the authenticated GitHub connector/MCP\n tools as the default remote control plane. Use them for repository, PR, issue, review\n thread, and Actions work, including inline-thread replies/resolution, Actions\n run/job/log/artifact inspection, and approved branch, file, or PR mutations. Missing\n `gh`, shell GitHub credentials, or direct shell network access is not a loss of this\n capability. The intended connection is `BigSimmo` with repository write access.\n Reserve administrator access for separately approved operations.\n- In Codex Cloud, use native Push, the authenticated GitHub connector, or GitHub's UI for branch\n publication and cleanup. `CODEX_CLOUD_GITHUB_PAT` is excluded from every Cloud agent shell.\n The helper `bash scripts/delete-codex-cloud-branch-with-pat.sh ` is\n operator-only outside Codex Cloud; it must reject `CODEX_CLOUD=1`, validate the exact\n non-protected ref and credential-free origin, and never print the token. If the native or\n connector path is unavailable, report the platform limit rather than copying a PAT into a\n profile, remote URL, cached file, or agent environment.\n- Confirm the exact repository and PR/thread/job before a write, and verify the connector\n result before treating the write as successful. A repository cannot sanitize a variable\n already inherited by the top-level task process; the tracked shims protect normal\n `node`/`npm`/`npx` commands. Report raw-parent exposure as a Codex Cloud launcher defect\n rather than weakening the provider-variable contract.\n- Cloud browser proof is Playwright/Chromium, Firefox, or WebKit container evidence, not\n physical iPhone Safari/PWA acceptance.\n\n## Cursor Cloud specific instructions (not Codex Cloud)\n\nDurable notes for Cloud Agents. Standard commands live in `README.md` and `package.json`; only non-obvious caveats are captured here.\n\n- Context7 peer-library docs habit (and the Next 16 local-docs carve-out) lives in `docs/agents-guide.md`. Project MCP is local `@upstash/context7-mcp@3.2.5` with `CONTEXT7_API_KEY` from env/Secrets. If the host-injected Context7 MCP returns quota exceeded, use `npx ctx7 library|docs …` with the same secret — do not invent peer APIs from training data.\n- Runtime: the app hard-requires Node >=24.15.0 <25 / npm 11.x (`engine-strict`; the preinstall and runtime gates enforce the minor floor, while `scripts/dev-free-port.mjs` rejects other majors). A compatible Node 24 is installed via nvm and symlinked into `/usr/local/cargo/bin` (first entry in `PATH`) so `node`/`npm` resolve to it in every shell. If a shell ever resolves `/exec-daemon/node` (v22) instead, prepend the installed nvm Node 24 bin to `PATH` (for example `\"$HOME/.nvm/versions/node/v24.18.1/bin\"`; run `ls \"$HOME/.nvm/versions/node\"` to confirm the exact patch version).\n- Live vs demo mode: the app auto-detects. When the Supabase + OpenAI env vars below are present (set them as Cloud Agent **Secrets** so they inject into `.env.local`/`process.env`), `isDemoMode()` (`src/lib/env.ts`) is false and the app runs against the live `Clinical KB Database` project (~2000 indexed docs) with OpenAI answer generation. When they are absent, dev auto-falls back to demo mode using the synthetic corpus in `src/lib/demo-data.ts` / `public/demo-documents/`. Required for live mode: `NEXT_PUBLIC_SUPABASE_URL`, `SUPABASE_PROJECT_REF`, `SUPABASE_PROJECT_NAME`, `NEXT_PUBLIC_SUPABASE_PUBLISHABLE_KEY` (`sb_publishable_…`), `SUPABASE_SERVICE_ROLE_KEY` (accepts the `sb_secret_…` secret key), `OPENAI_API_KEY`. Keep `RAG_PROVIDER_MODE=auto` so OpenAI is used with graceful source-only fallback. `E2E_USER_EMAIL`/`E2E_USER_PASSWORD` power CI env-check and Playwright.\n- Live-mode caveat: `RAG_PROVIDER_MODE=auto` attempts OpenAI (fast → strong route); if generation fails the built-in quality gates it silently degrades to a deterministic \"Source-only\" answer that still cites real documents — this is expected, not a failure. The header sign-in UI exposes magic-link + OAuth only (no password field), but the `/api/answer` + retrieval flow works server-side without a browser session.\n- What still won't run in this VM even with secrets: `npm run worker` also needs the Python OCR stack (`worker/python/requirements.txt`) and heavy parsing deps; Supabase edge functions need Deno v2.x + deployment. `verify:release` additionally runs governance/eval gates. Treat missing-secret failures of `check:supabase-project`/`verify:release` in demo mode as expected, not regressions.\n- Dev server: `npm run dev` selects a stable per-project localhost port (e.g. `4461`), binds `0.0.0.0`, and prints the exact URL. Never assume port 3000/3001/3002. `npm run ensure` starts/verifies it in the background.\n- Verification without secrets: `npm run lint`, `npm run typecheck`, and `npm run test` (vitest) all pass offline. `npm run verify:cheap` also runs runtime, GitHub Actions pin, CI-scope, and sitemap checks. `npm run verify:pr-local` adds format, conditional build/client-bundle scanning, and RAG fixture/manifest validation without repeating unit tests; browser, Docker/Supabase, audit, and provider checks remain separate. See `docs/testing.md` for lock, live-test, Playwright, and flake-ledger rules. If `check:installed-lock-parity` or `check:playwright-browser-revision` reports Playwright/image drift (`#255`), do not force a mismatched Chromium path — delegate browser proof to CI Production UI (see `docs/testing.md` § Testing speed playbook).\n- For GitHub-related work authorised in this session, prefer the connected GitHub\n connector/MCP tools first for PR, issue, comment, review-thread, and Actions tasks they\n support (including run/job/log/artifact inspection and review-thread replies/resolution).\n A missing `gh` CLI is not a blocker for connector-supported work; never add a PAT as a\n workaround. The intended connection is `BigSimmo` with repository write access.\n Reserve administrator access for separately approved operations. Verify the exact target and connector result before any write. Ordinary\n authorised shell `git` branch publication remains allowed; use shell `gh` only for a\n genuine connector gap and only when the task permits it.\n\n-- task skill --\n---\nname: task\ndescription: Manage Database task lifecycle transitions safely, including start, status, handoff, landed proof, and cleanup planning. Use when beginning work, checking task state, preparing handoff, proving integration, or closing a session.\n---\n\n# Task\n\n1. Use the required task-start script before repository changes.\n2. Run `npm run workflow:lifecycle -- --phase --write-evidence`.\n3. Inspect branch, upstream, worktrees, status, and operation markers for the selected phase.\n4. Preserve dirty, ambiguous, active, or unmerged work.\n5. Keep fetch, push, PR, merge, and provider checks approval-gated.\n6. Report the exact state transition proved and any action still requiring confirmation.\n\n-- release skill --\n---\nname: release\ndescription: Assemble Database release-readiness evidence, risk-scoped local checks, governance proof, rollback notes, and approval-gated final verification. Use for release, merge readiness, production handoff, or go-live confidence.\n---\n\n# Release\n\n1. Inspect intended diff, branch state, review ledger, release notes, migrations, configuration, and rollback.\n2. Run the flight plan and complete the smallest focused checks before `npm run verify:pr-local`.\n3. Include UI, clinical, RAG, migration, privacy, or deployment proof only when selected by risk.\n4. Verify required governance and handoff documentation is complete.\n5. Do not run `verify:release`, hosted CI, GitHub, Supabase, OpenAI, or deployment commands without approval.\n6. Return a ready/not-ready decision with passed, failed, skipped, and gated checks.\n\n-- gh auth --\nYou are not logged into any GitHub hosts. To log in, run: gh auth login\n\n-- current pr --\nTo get started with GitHub CLI, please run: gh auth login\nAlternatively, populate the GH_TOKEN environment variable with a GitHub API authentication token.\n","Script completed\nWall time 0.5 seconds\nOutput:\n",{"_432":581,"_411":412,"_434":418},{"_456":572,"_45":582,"_495":583,"_439":584,"_194":498,"_499":-5,"_425":116,"_95":500},"ctc_0b6c0fd24415bb66016a7c9ce138ac8195a3e8f78ad2526ed6","const r = await tools.exec_command({cmd:\"cat AGENTS.md; printf '\\\\n-- task skill --\\\\n'; sed -n '1,240p' .agents/skills/task/SKILL.md; printf '\\\\n-- release skill --\\\\n'; sed -n '1,220p' .agents/skills/release/SKILL.md; printf '\\\\n-- gh auth --\\\\n'; gh auth status; printf '\\\\n-- current pr --\\\\n'; gh pr status --json currentBranch 2>&1 || true\",\"workdir\":\"/workspace/Database\",\"yield_time_ms\":10000,\"max_output_tokens\":30000}); text(r.output);\n",{"_444":418},{"_432":586,"_411":412,"_434":418},{"_435":-5,"_503":587,"_45":588,"_439":589,"_507":590,"_95":509},"gAAAAABqfJzhHWCKDjYYH75gLXRZUJVom92LsdZPN_s8iKAIJ2e1ra0j0Aap9WxgLfWH9f1Yrc9jTQC77y2fWgP82sEyklgya6Yc6op09LIL22fts0fahh8ivJlK9DyXstsVxf8mK4qgntQUiE6gOALQTAJGzMOf4H1FyY15rWwkc68kUpE2uapAe5NaiSLJulbs1NJRu00PxE9f8ZifzX5Pdk4yKekWMVrh1iLPwioGB0GUD8To45FuvCuuygDcQMcTEOxGyu2XYUsJqucaKlo-wQPUYylg-vSJf10h7POkZedNdmzvddhIoFeIVBgENq3jlek5g7Un7Ez4gAvtXvuONIA7Xar4eBQNgDskM9SEJhM6RAQ2x8s5L3zJz6mgFrx1GeVCV_ysWdK-XB-qYd_Aup-fQfpsXpU84qT6BP2U-8b0IuFwR7NHkgEK52ZwD2S00duQ3OIafF8ZxwqzPVDmE3gRlv5Ye-1r615YWDFaVv-1FSNKrdbCkMg17o8piKZ561CmUiVpn_X_1Id_dRQ99vzOtMFzaZEOJu0187wm8oVrWZ6G3TpEkKTqydVtYlHj9xfklCEzx3CBfO8IEUv2aPSB83BXEkgL6DEaDKnrkVq_GGNKkOHN3_VlircMyiUcDi_2qq4B9uycFy2JZasacVrSytDDI-S0WhbEaQDnsqt5Tvb0KpACySdPuTQIr4RlLw49tmL4LI8DAUN4JyzulTKl5G_sjNxwLr-7XCBiF8GYPpXn7ZN-zueorVKA9WTmHuzQILG0Ae9Ft-aExDYfVSsN5n9kTO7zRlItRB8Ivv8fcJlFtVgRmvtjIvmuIBr1Yd644FQps4imjmoBxh8S9XuDvTq0-L_ESlBoCyjGDOZGKVEzMJxLgtFngVg1i9_0oaIyXhbr3PPWfRULOoY42pRHXerLFTwtIZn8m8REb9sdgllRNXosFqkct-hCpKqMg3L5919sYTqsi14XrrNvs7igflMaHPLm_gvvAVZVT-r7C1UFMYTo9gFy7L2ygj0s1c4Q-WwurQFdAEvzn281A9UzO3ilHpHo97WtPgcDl0t51iecMAyduUL-JAK2CuVRNvcCVd0LRS67im6l6V3mZNOBN-P9vbE8QQG69Boj5mMNnp49ky-QSXQ12vWdHK39lIuaQ6lPw-pPJyruXaLevd4YgJuIkxn6TDb-BE0AMtiKBgt-BGqHkos73LAztlv_xKgn5P0HMOLSIDi3hGLTvNVFqSvfcPNou7pC55sSM_QdqciX2SfTGuNuvSC-XL409hYwO7McowKtIRL2Jogf_L2I1Abi5wBUpTgOR7qTa2DIy_Qv-UbRprwOw0OGQApSgKhMmCL9","rs_0b6c0fd24415bb66016a7c9cdf7408819592ef38deb807c903",{"_444":418},[591],{"_49":592,"_95":512},"**Evaluating PR creation alternatives**",{"_450":594,"_432":595,"_411":412,"_434":418},1786551521224,{"_435":596,"_45":588,"_507":597,"_95":509},[],[592],{"_432":599,"_411":412,"_434":418},{"_456":600,"_45":-5,"_439":601,"_194":-5,"_459":602,"_95":461},"call_bFLlbGA0bP8FLRQvXWze67oL",{"_444":418},{"_346":603,"_463":-5},[604,605],{"_49":607,"_95":467},{"_49":606,"_95":467},"[]","Script completed\nWall time 0.0 seconds\nOutput:\n",{"_432":609,"_411":412,"_434":418},{"_456":600,"_45":610,"_495":611,"_439":612,"_194":498,"_499":-5,"_425":116,"_95":500},"ctc_0b6c0fd24415bb66016a7c9cdd5da48195aa1e92a31d5dcd2a","const names = ALL_TOOLS.filter(x => /make_pr|github|pull.request/i.test(x.name+\" \"+x.description)); text(names);\n",{"_444":418},{"_432":614,"_411":412,"_434":418},{"_435":-5,"_503":615,"_45":616,"_439":617,"_507":618,"_95":509},"gAAAAABqfJzd13wGk6NNdK0dEF6dmZgi8NwAFpUPvEkvs8nmS33uhpI6mxpknHA6KOSMSX6mc_LlgP4BScJdSgbkJ0rZ3l0AycprRwuLphs0SUOTU0gOZlsBDAkIPoZ03bVBnZDUOfgYx_GrQgWanB1kd4XIEEIqFSGvsqhZUvnCiNFx3XAHAMNgB0qmD9X5XVEpj4srHKLJPMEyJpYeWxJIN227fsI3wAYx_lkS9W4EAnbqwhFJECOcup2TJYqXmreg2v8L8v8UsHGiMkYnSfeWG5KYKFec1Ru4Dlwae3tXLtDOnOBmIBpYg2y1e9uHseHk6469maNNWXZVSoPROdcAK68OxxvATRQ3sOaSyf-LVfU8mwCNu_jTc09hARC-MlsGwhhZptnRHgHNj-0CK7CzuCplrASMTCKaHkBF2YsJ3xQ8Ly6qMaMFaIEGI1RWnkG-fU7Ztpz-raCcoR5k9PjlpCZiSn_BVYzMHCOVcKbosc6UNLA3XWLWhUWTNMQF5GhM83aWBNogw01UHNgQKoIHWo4NlSpDSwvhC3kFd-gT1X7vnTAE6ALgsKxM2QgEMDqVCyInRbb-u11zesJorb_Elt-k4uAnuxHoRnmAMIAknbP3CFMiRymXFVjQlLeAriuciu2j1cn-GAbhxaorERRUkhfnOm-m-DAgavpMBY2MG3oZnCnacQYf1-09GrFUpDZSPLnyFi8Xn7saOftKA9-sHvO2e11d1mNdVl5bmhuCkfBbVZ0ZMVed6fZ9pqM4buWfMnqb6wjP1ya-qp3uGjW_4nYeRTW_1vTeOVx9aEhMQuYjn_7QbGJ0_2mVHNdmxLgjqvaMWoc4aRVswY5EyneDDfYmGE3h1YvlewwBZd0VWRidODm_FFWNeMEq9JJ13mOrpVe2-O1RR0gYxrcxHBAcx78B_GlAenEoioMbbE7ITzgyNDMOU64NhOPszLJ1HlCS3fOlqwDtB1Y9Q7UGqhxVlL-a7agLaq-7CJIiAcn1mb5T1dadulQJ8lsP4XZPE2X8biS56hiqfyBAmUWayk1W9gWKsrn0cYPIJewmQ67ke99SZmezLrTrpfQRYch3afIikueHgUZ_okzbWYnttWUiP3Q3Cgbzr_vUPXs0BaxRabmsDupnvgU2SUMaWSAn6CIQhwvpcZYvZyCdEZZUSrT24pRZ-kyrkII0TgXRHW2svJk7A3ANZeaL9gJI8lEr0SbxMc5nc_jM","rs_0b6c0fd24415bb66016a7c9cdc15dc819592e3ff0e84525e3a",{"_444":418},[619],{"_49":620,"_95":512},"**Verifying GitHub authentication and tool availability**",{"_450":622,"_432":623,"_411":412,"_434":418},1786551517353,{"_435":624,"_45":616,"_507":625,"_95":509},[],[620],{"_450":627,"_432":628,"_411":412,"_434":418},1786551515102,{"_472":629,"_473":630,"_475":631,"_477":478,"_416":632,"_479":35,"_45":633,"_481":634,"_483":484,"_425":116,"_95":485},"## work\n\n-- remotes --\norigin\thttps://github.com/BigSimmo/Database.git (fetch)\norigin\thttps://github.com/BigSimmo/Database.git (push)\n\n-- branches --\n* work 5534708 docs(review): record ECG pulse handoff\n\n-- recent --\n5534708 (HEAD -> work) docs(review): record ECG pulse handoff\n6a8f940 perf(answer): optimise ECG loading pulse\nf66691f Merge pull request #1847 from BigSimmo/claude/filter-contract-global\n5617013 fix(filters): use the radius-xs token instead of an arbitrary radius\n01ece2b Merge remote-tracking branch 'origin/main' into claude/filter-contract-global\n","/bin/bash -lc \"pwd; printf '\\\\n-- AGENTS --\\\\n'; find .. -name AGENTS.md -print; printf '\\\\n-- status --\\\\n'; git status --short --branch; printf '\\\\n-- remotes --\\\\n'; git remote -v; printf '\\\\n-- branches --\\\\n'; git branch -vv; printf '\\\\n-- recent --\\\\n'; git log -5 --oneline --decorate\"",[635],235,"exec-1c7d2850-fe39-4e9d-bca5-abe6c0423df6","13497",{"_473":636,"_95":529},"pwd; printf '\\n-- AGENTS --\\n'; find .. -name AGENTS.md -print; printf '\\n-- status --\\n'; git status --short --branch; printf '\\n-- remotes --\\n'; git remote -v; printf '\\n-- branches --\\n'; git branch -vv; printf '\\n-- recent --\\n'; git log -5 --oneline --decorate",{"_432":638,"_411":412,"_434":418},{"_456":639,"_45":-5,"_439":640,"_194":-5,"_459":641,"_95":461},"call_NhxzXQHhQ076l6RXZ8KWyoie",{"_444":418},{"_346":642,"_463":-5},[643,644],{"_49":646,"_95":467},{"_49":645,"_95":467},"/workspace/Database\n\n-- AGENTS --\n../Database/node_modules/@supabase/supabase-js/AGENTS.md\n../Database/node_modules/@supabase/storage-js/AGENTS.md\n../Database/node_modules/@supabase/auth-js/AGENTS.md\n../Database/node_modules/@supabase/postgrest-js/AGENTS.md\n../Database/node_modules/@supabase/realtime-js/AGENTS.md\n../Database/node_modules/@supabase/functions-js/AGENTS.md\n../Database/node_modules/next/AGENTS.md\n../Database/AGENTS.md\n\n-- status --\n## work\n\n-- remotes --\norigin\thttps://github.com/BigSimmo/Database.git (fetch)\norigin\thttps://github.com/BigSimmo/Database.git (push)\n\n-- branches --\n* work 5534708 docs(review): record ECG pulse handoff\n\n-- recent --\n5534708 (HEAD -> work) docs(review): record ECG pulse handoff\n6a8f940 perf(answer): optimise ECG loading pulse\nf66691f Merge pull request #1847 from BigSimmo/claude/filter-contract-global\n5617013 fix(filters): use the radius-xs token instead of an arbitrary radius\n01ece2b Merge remote-tracking branch 'origin/main' into claude/filter-contract-global\n","Script completed\nWall time 0.6 seconds\nOutput:\n",{"_432":648,"_411":412,"_434":418},{"_456":639,"_45":649,"_495":650,"_439":651,"_194":498,"_499":-5,"_425":116,"_95":500},"ctc_0b6c0fd24415bb66016a7c9cd81d808195b0ad1920116abb60","const r = await tools.exec_command({cmd:\"pwd; printf '\\\\n-- AGENTS --\\\\n'; find .. -name AGENTS.md -print; printf '\\\\n-- status --\\\\n'; git status --short --branch; printf '\\\\n-- remotes --\\\\n'; git remote -v; printf '\\\\n-- branches --\\\\n'; git branch -vv; printf '\\\\n-- recent --\\\\n'; git log -5 --oneline --decorate\",\"workdir\":\"/workspace/Database\",\"yield_time_ms\":10000,\"max_output_tokens\":20000}); text(r.output);\n",{"_444":418},{"_432":653,"_411":412,"_434":418},{"_435":654,"_437":-5,"_45":655,"_439":656,"_441":657,"_99":96,"_95":443},[658],"msg_0b6c0fd24415bb66016a7c9cd79c9881959315ae0ea6a97e1f",{"_444":418},"commentary",{"_49":659,"_95":447},"Plan effort: low; build effort: high, because the merge procedure is straightforward but safely preserving branch history, resolving any conflicts, and verifying the exact pushed/hosted state are execution-sensitive.",{"_450":661,"_432":662,"_411":412,"_434":418},1786551512125,{"_45":655,"_441":657,"_49":659,"_95":453},{"_432":664,"_411":412,"_434":418},{"_435":-5,"_503":665,"_45":666,"_439":667,"_507":668,"_95":509},"gAAAAABqfJzXwaRr67-VrvPsHUCYgN7KRNah6lLrbOxl-P3q2EjPUe35AiZtnQaqXrraOE55gB3BaXKsGArTa52HJvIWhA9mAAAwNpbZtSTsIjJJBtIraR2946Uzy4sBjZ1FkJIeSftAqrqcpkTdDBenxgkAOVBBLPu5Vusphi-SK8jN73Z8CLAUDN2jaMKpZ-tlFHMp6R-vjIcKgWFRZA6FVJuWYQyqZzSktR5VpJ8QNGs9ZhXhB61vy2JyEY9e2Y6f49Gwi9AX6BJGLJCpduv7cp5bR-Hm_0nQxx61QUUythFZOfmbb4Uz3F9PtxdH23FTfLuPaMFUAwoh-W4NFc1jY0RO8XU-Po2FLz5Qob6fdfSHLlZWruyJU5C5Ehha__2oqVNDFn4oBDldUoZxuWGrK0FzajPrnU4GschihhK3ZR9RAbwxtkXNQbcfzHPlqPyrt4P8qZm6B0qL0dnYRj79UvzB-xgwjoVdm70oOWth8XEj8rjLsDXsgB0EVwHMZhBZvQWcMNIN2hiLm10GShWu-Lao2YhGStpriGRDniIlIMjESroiMIFwZQU9cjKuahDJTbTH6yMbF_ySvnBNzj_uOXE3HzqpblHWKfpV8ISFf1asV9bvP5HuO3GutaaVpSoywuQGxFskt4sIiVtxc6OWoasvATP5wcJFuNVfMIkffFJXCJ5ZjXxdXkfDfNUjADA33R6i_GIjAofyJN0q_UAznUqTigwruRcdhV48zSe6GdoAA3PrVd5jFTo0hu49iHjqHosW_R3ZXORPL-TiwEEBK4szAspXdIXznUHGaE0FHqlc4VLpH_MtQLyBuaTvvddZ-5hW1y9I_XggSG6YjNsNiYI-cpAih7xn6gQ6KYhOZnEAQKeRYzIj32r4cLBOfKJqvcPpz6v8qtlp-fh-zLyB-p75pe4j9gZd52fqbbaxBhTZ63PzwEizz_BcnVbWJnBCoLwX5kqe6tF8BZeVi91rf3FVUDqaCKbL_VC6kDQqPF5eeCj6vVERfn6n4r1PznaJOQ31TrYaN4EWXLqbNWCzqoG5eNubXSqab6EXAqkwh6PXwXIoJ53oq5tf6ekue_vy2KUkNJzbv_bq-Fdy-TiAOmNzLhks63c5EZN8oa_FTmyQ9f36fHaFCCgldZicrnOY9WqXeChDv4bFOTQnsIXXG6yy-VVeJ67srpt75zbBAqdfDyHeT7RTIYFJLMExbiBRAORKNR8axDRuNhCnzd313LBAolaOl3VEdeSKuGpAE7_l9lXdm4kakA4E1E2a-3C6vyemdl6QhycpYx2WyuHNvOemOIDZP-AJTnQLSf11H0xAaHzNFFW93fBWRPPVRLaBn7qqjui_JOnkH9fnzqKODpdYGe8XXtTkg_1dLacnZktzy9i569-ZPC32k8WJ5_rS7-264lXQaGBYIuGGawlww9RU3jNbZgz07VjLKqbvUQkau39PbK-L1rpAWj4zTh2btamgAxc7f2HE3q5S2D4qOKEpj4rALw==","rs_0b6c0fd24415bb66016a7c9cd58db08195875295727f318a90",{"_444":418},[669],{"_49":670,"_95":512},"**Inspecting GitHub actions and make_pr tool**",{"_450":672,"_432":673,"_411":412,"_434":418},1786551511622,{"_435":674,"_45":666,"_507":675,"_95":509},[],[670],{"_450":677,"_432":678,"_411":412,"_434":418},1786551506342,{"_679":-5,"_435":680,"_45":681,"_95":682},"clientId",[683],"019ff6c4-95a6-7e82-9c0d-088a04e56995","userMessage",{"_49":684,"_685":686,"_95":49},"\nYou are Codex, assisting with follow-up actions on a GitHub pull request.\n\nInput blocks\n------------\n… # The comment or event that invoked you\n… # PR metadata (title, branches, SHAs, status, etc.)\n… # Comments / Reviews for the PR\n\nPossible triggers\n• A user mentions you (@codex)\n• A reviewer requests changes\n• An automated or internal system asks you to review / update\n\nGuidelines\n1. Read the block first and treat it as the primary intent.\n2. Always consult and to interpret and validate the trigger; use only context that materially affects your decision and ignore the rest.\n3. If the trigger comes from a comment thread, the first block will be combined earlier comments from the same thread, clearly indicated with `Comments in the same thread`.\n4. Remaining blocks are in chronological order, oldest first, one block per comment.\n5. When the trigger relates to CI/build status (e.g., “help me fix CI”), incorporate CI/status details found in as supporting context.\n6. If code change is needed, generate a **new** PR with the requested changes. The PR title and message should summarize the changes **on top** of the original pull request.\n@codex Fix the failing PR mergeability checks by merging the current origin/main into this existing feature branch, resolving any conflicts safely, running the smallest relevant repository checks, running `npm run format`, committing the result, and pushing with an ordinary non-force push. Verify the pushed 40-character head SHA and the resulting hosted checks. Do not rebase or rewrite history, force-push, merge or close the PR, enable auto-merge, delete or rename branches, push to any protected branch, deploy, access production data, or invoke live OpenAI/Supabase providers. If GitHub write access is unavailable, stop and report the exact missing capability without attempting credential workarounds.{\"title\":\"perf(answer): optimise ECG loading pulse\",\"body\":\"## Summary\\n\\n- Optimises the existing ECG answer-loading trace with a shorter travelling pulse and faster, density-specific timing: 1.8s expanded and 1.6s compact.\\n- Keeps the animation ultra-lightweight: one inline SVG sweep path animated by CSS `stroke-dashoffset`, with no JavaScript timer, canvas, new runtime state, or dependency.\\n- Preserves a static ECG baseline for reduced-motion users, forced-colour support, compact follow-up placement, and removes the trace when generation completes or errors.\\n\\nRAG impact: no retrieval behaviour change — this PR changes only answer-progress animation timing, pulse length, and browser coverage; retrieval, ranking, prompts, citations, and answer payloads are unchanged.\\n\\n## Verification\\n\\n- [ ] `npm run verify:pr-local`\\n - Partial due repository coordinator contention: runtime, installed-lock parity, changed-file formatting, and lint passed; admission was then denied while another worktree held focused-test capacity.\\n- [x] `npm run format` — passed twice, including the final committed ledger state.\\n- [x] `npm run check:design-system-contract` — passed.\\n- [x] `npm run typecheck` — passed; the final isolated production build also completed TypeScript validation.\\n- [x] Focused Vitest — 41/41 passed (`answer-progress.test.ts` 8/8; `tailwind-merge-config.test.ts` 33/33).\\n- [x] Focused Chromium answer-progress journeys — expanded timing, compact follow-up timing, error cleanup, reduced motion, and forced colours passed. The compact journey was rerun 1/1 after explicitly selecting normal-motion media; the preceding full run's other 3 journeys passed.\\n- [x] Isolated production build — passed, including TypeScript and 1,710 generated pages.\\n- [x] `npm run eval:rag:offline` — fixture and manifest validation passed (36 golden cases, 23 suites); the command then exited nonzero because its follow-up Vitest admission was denied by another worktree's Playwright lease.\\n- [ ] `npm test`\\n - Ran once. Broad suite reported 25 unrelated Windows/harness failures, dominated by missing POSIX `ln`/Bash exit 127, temporary-directory EPERM cleanup, and hosted-Linux provenance fixtures. The focused changed-owner suites remained green.\\n- [ ] `npm run check:production-readiness`\\n - Ran and failed closed in the isolated worktree because Supabase/OpenAI credentials are intentionally absent. Node 24 and the query-hash boot guard passed; no provider call was made.\\n- UI verification not run: the full `verify:ui` gate was not stacked after focused changed-owner Chromium proof.\\n- Release verification not run: this PR is not a release or deployment.\\n- Live retrieval/answer evals not run: retrieval, synthesis, prompts, citations, and answer payloads are unchanged.\\n\\n## Risk and rollout\\n\\n- Risk: Low. Animation-only CSS/SVG timing change. Residual visual/compositor risk remains on physical iOS Safari and installed PWA because local Chromium cannot prove those environments.\\n- Rollback: Revert commits `55347084da56f7888b57f7811007b2146e60abe9` and `6a8f940f3a1a2521b17e52f85218755e43046269`.\\n- Provider or production effects: GitHub branch and this PR only. No deployment, production mutation, clinical data access, or model/provider request.\\n\\n## Clinical Governance Preflight\\n\\n- [x] Source-backed claims still require linked source verification before clinical use\\n- [x] No patient-identifiable document workflow was introduced or expanded without explicit governance approval\\n- [x] Supabase target remains `Clinical KB Database` (`sjrfecxgysukkwxsowpy`)\\n- [x] Service-role keys and private document access remain server-only\\n- [x] Demo/synthetic content remains clearly separated from real clinical sources\\n- [x] Source metadata, review status, and outdated/unknown-source behavior remain conservative\\n- [x] Deployment classification/TGA SaMD impact was checked; clinical decision-support behavior is unchanged\\n\\n## Notes\\n\\n- Final scoped review found no P0–P3 defect.\\n- The branch is 47 commits behind the refreshed remote base, but a read-only merge-tree check confirmed a clean merge. The append-only ledger preserves both histories.\\n\",\"base_ref\":\"7362dd44609af627a1c8edbba67477869997d25e\",\"head_ref\":\"55347084da56f7888b57f7811007b2146e60abe9\",\"merge_commit_sha\":null,\"type\":\"pull_request_info\"}{\"type\":\"pull_request_comment\",\"body\":\"[supa]:sjrfecxgysukkwxsowpy\\nThis pull request has been ignored for the connected project `sjrfecxgysukkwxsowpy` because there are no changes detected in `supabase` directory. You can change this behaviour in [Project Integrations Settings ↗︎](https://supabase.com/dashboard/project/sjrfecxgysukkwxsowpy/settings/integrations).\\n\\n
\\n\\nPreview Branches by Supabase.\\nLearn more about [Supabase Branching ↗︎](https://supabase.com/docs/guides/platform/branching).\",\"path\":null,\"side\":null,\"line\":null}{\"type\":\"pull_request_comment\",\"body\":\"\\n\\n\\n> [!WARNING]\\n> ## Review limit reached\\n> \\n> You’ve reached a temporary PR review limit under our [Fair Usage Limits Policy](https://docs.coderabbit.ai/management/plans#fair-usage-limits-policy).
\\n> Your recent review volume is higher than typical usage, so adaptive limits are currently applied.\\n> \\n> **Next review available in:** **56 minutes**\\n> \\n> Your organization has reached its usage spending cap. Adjust your spending cap in the [billing tab](https://app.coderabbit.ai/settings/billing?tab=usage&orgId=420f13a9-28c9-4ad8-9f2e-1fd2cf273b7c).\\n> \\n>
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How can I continue?
\\n> \\n> After more reviews become available, a review can be triggered using the `@coderabbitai review` command as a PR comment. Alternatively, push new commits to this PR.\\n> \\n> To avoid repeated limits, reduce automatic review volume by pausing incremental auto-reviews earlier, using label-based review opt-in, excluding WIP or generated PR titles, or requesting reviews manually when the PR is ready. If your team needs uninterrupted high-volume reviews, an organization admin can enable usage-based reviews.\\n> \\n>
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How do review limits work?
\\n> \\n> CodeRabbit enforces per-developer PR review limits for each organization. Most developers receive the normal plan review availability.\\n> \\n> For paid Pro and Pro+ PR reviews, CodeRabbit uses adaptive limits for sustained high-volume activity. When a developer's recent PR review activity reaches the 95th percentile or higher among CodeRabbit users, additional reviews become available more gradually as earlier reviews age out of the rolling window.\\n> \\n> Please refer [docs](https://docs.coderabbit.ai/management/plans#rate-limits) for additional details.\\n> \\n>
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Review details
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⚙️ Run configuration
\\n> \\n> **Configuration used**: Path: .coderabbit.yaml\\n> \\n> **Review profile**: CHILL\\n> \\n> **Plan**: Pro\\n> \\n> **Run ID**: `ee9976df-9a4a-4b8b-94cb-88286979252f`\\n> \\n>
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\\n\\n\\n\\n\\n\\n---\\n\\n\\n\\n\\n_{Comment `@coderabbitai help` to get the list of available commands.}\\n\\n\",\"path\":null,\"side\":null,\"line\":null}","text_elements",[],{"_432":688,"_411":412,"_434":418},{"_435":689,"_437":-5,"_45":-5,"_439":690,"_441":-5,"_99":356,"_95":443},[691],{"_444":418},{"_49":684,"_95":467},{"_432":693,"_411":412,"_434":418},{"_435":694,"_437":-5,"_45":-5,"_439":695,"_441":-5,"_99":356,"_95":443},[696,697],{"_444":418},{"_49":699,"_95":467},{"_49":698,"_95":467},"\n /workspace/Database\n bash\n 2026-08-12\n Etc/UTC\n /workspace/Database\n","# AGENTS.md instructions for /workspace/Database\n\n\n\n\n# This is NOT the Next.js you know\n\nThis version has breaking changes — APIs, conventions, and file structure may all differ from your training data. Read the relevant guide in `node_modules/next/dist/docs/` (resolved from this file's directory; in monorepos the `next` package may not be visible from the repo root) before writing any code. Heed deprecation notices.\n\nThis block is written and re-added by `next dev` — verify at `node_modules/next/dist/server/lib/generate-agent-files.js`. Removing it from a diff only re-creates the uncommitted change; committing it with your work keeps the tree clean.\n\n\n\n\n\n## Dependency shortcut\n\nWhen the user types exactly `dependency` as the entire task message, after trimming surrounding whitespace, treat it as a shortcut for safe dependency maintenance. This is a Codex chat shortcut, not an app feature, script, automation, or CI workflow.\n\nGoal:\nUpdate direct project dependencies to the newest stable compatible versions, regenerate the existing lockfile, identify source/config/test code that relies on old dependency behavior, make the smallest safe compatibility changes, and verify the result. Do not rewrite the project, switch package managers, discard user work, commit, push, deploy, or run destructive cleanup without explicit confirmation.\n\nStart with read-only inspection:\n\n- Check branch, upstream, worktrees, recent relevant history, and `git status`.\n- If on `main`, `master`, `develop`, `release/*`, or another protected/base branch, create/switch to `codex/dependency-maintenance` before editing, if safe.\n- Inspect manifests, lockfiles, package-manager config, runtime/toolchain files, workspace layout, CI config, scripts, and documented checks.\n- Detect repo-local install/dev/test/build/watch/server processes that could race dependency updates.\n- Preserve all existing staged, unstaged, and untracked user work.\n\nPackage-manager rules:\n\n- Use the package manager already used by the repo: npm, pnpm, yarn, bun, pip, poetry, uv, cargo, go, bundler, gradle, maven, dotnet, or equivalent.\n- Do not switch package managers or create a new lockfile type.\n- Respect engines, runtime versions, lockfiles, workspaces, wrappers, and repo conventions.\n- In monorepos or polyglot repos, update each ecosystem through its native workspace-aware workflow.\n\nDependency update rules:\n\n- Identify outdated direct production and development dependencies.\n- Compare both manifest ranges and locked/installed versions against latest stable compatible releases.\n- Treat “outdated packages found” exit codes as normal where applicable.\n- Avoid prerelease, alpha, beta, canary, rc, next, nightly, and experimental versions unless the stable channel points there and explain why.\n- Do not use force or legacy flags that bypass peer, engine, resolver, or lockfile integrity checks unless explicitly approved.\n- Do not run forced audit fixes or broad destructive codemods.\n- If latest is incompatible, use the newest compatible version and document why.\n- Group risky updates coherently, such as framework plus plugins, test runner plus coverage, lint core plus plugins, or runtime plus adapter packages.\n\nCompatibility audit:\n\n- For every major update and every core framework/runtime/build/test/lint/UI/database update, inspect release notes, migration guides, peer ranges, engines, and changelogs when available.\n- Search source, tests, scripts, config, and CI for imports, APIs, CLI flags, config keys, environment variables, plugin names, generated types, or file paths tied to changed dependencies.\n- If old dependency behavior is used, make the smallest safe migration that preserves behavior.\n- If migration is large, risky, architectural, or product-affecting, stop after discovery and provide a concrete fix plan with affected files, package versions, sequence, and verification commands.\n- Add or adjust focused tests only when needed to prove migrated behavior.\n\nGenerated and sensitive files:\n\n- Do not intentionally keep dependency directories, build outputs, caches, logs, local state, test artifacts, browser artifacts, `.env*`, secrets, keys, tokens, credentials, or machine-local config.\n- Manifest and existing lockfile changes are allowed.\n\nVerification:\n\n- Run a cheap baseline first when useful to distinguish pre-existing failures.\n- After updates, run install/dependency validation, then relevant lint, type check, tests, build, smoke/UI/a11y, codegen, integration checks, or equivalent.\n- For frontend/browser-facing changes, run browser/UI verification when framework, bundler, router, styling, test runner, or browser automation changed.\n- If a check fails, fix dependency-related breakage and rerun the smallest failing check before broader checks.\n- Run non-mutating audit/vulnerability checks when available.\n- Confirm no repo-owned dev server, watcher, or temporary process was left running unless requested.\n\nFinal response for `dependency` must include:\n\n- Branch and worktree state.\n- Package manager, runtime, manifests, and lockfiles detected.\n- Outdated dependencies found.\n- Dependencies updated, old version -> new version.\n- Dependencies not updated and why.\n- Files changed.\n- Compatibility migrations and old APIs found/fixed.\n- Checks run and results.\n- Checks not run and why.\n- Audit/vulnerability summary.\n- Generated/untracked files left behind.\n- Branch movement, external repo changes, or process cleanup observed.\n- Risks or follow-up work.\n- Confirmation that no commit or push was made unless explicitly requested.\n\nAfter setup:\n\n- Verify root `AGENTS.md` contains exactly one `## Dependency shortcut` section.\n- Show the final diff for `AGENTS.md`.\n- Summarize what changed.\n- Confirm no dependency update, install, test, build, audit, commit, or push was performed.\n\n\n\n\n\n## Bug-hunter shortcut\n\nWhen the user types exactly `bug-hunter` as the entire task message, after trimming surrounding whitespace, treat it as a shortcut for targeted defect discovery.\n\nExecution rules:\n\n- Invoke the `bug-hunter` skill first.\n- Prioritize reproducible defects over code style, naming, or formatting feedback.\n- Trace realistic failure paths: invalid input, empty states, retries, race/concurrency issues, stale state/cache, network/auth failures, permissions, and boundary values.\n- For each finding, include trigger, expected behavior, actual risk, and the smallest proof (or targeted test/check) that would catch it.\n- If no high-confidence defect is found, explicitly state that and list the most likely residual risk area.\n\nScope and safety:\n\n- Keep the hunt scoped to code touched by the user request unless the defect clearly crosses module boundaries.\n- Do not make broad refactors while hunting; propose minimal fixes for confirmed issues.\n- Run the smallest focused verification for each confirmed defect, then expand only if needed.\n\n\n\n\n\n## Codex review throttling and routing\n\nDo not review branches opportunistically. Review the current changed diff, PR, or branch only when the user explicitly asks for review/audit/hunter/cleanup/upload work, when CI/check failures are the task, or when the current change touches high-risk areas that require a targeted review before handoff.\n\nUse `docs/codex-review-protocol.md` as the shared review protocol for every repo-local review skill, branch/PR review, audit, bug hunt, release-readiness check, and PR/CI review.\n\nBefore reviewing a branch or PR:\n\n- Run `npm run ledger:lookup -- --scope \"\"`. It resolves the HEAD, matches the abbreviated SHAs older records used, and prints an explicit verdict. Do not read `docs/branch-review-ledger.md` by eye — live + archive rows are many, and eyeballing is how repeat reviews slipped through. `ledger:lookup` reads archives under `docs/archive/branch-review-ledger-*.md` too.\n- On `ALREADY REVIEWED`, summarize the prior ledger outcome and skip the repeat review unless the user explicitly requests a fresh pass.\n- On `NOT REVIEWED at this HEAD`, review only the changed scope and append a record after the review.\n\nBefore reviewing multiple branches:\n\n- Build a short branch inventory first: branch, upstream, ahead/behind, last commit, and merged status.\n- Skip branches already merged into `main`.\n- Skip unchanged branches already recorded in `docs/branch-review-ledger.md`.\n- Do not re-review every branch after ordinary coding tasks.\n- If a repeated request targets unchanged reviewed branches, summarize the prior result and ask before doing another full pass.\n\nReview routing:\n\n- `diff-review`: Use for explicit review of the current diff, PR, or named branch. Findings first, ordered by severity, with file/line evidence.\n- `bug-hunter`: Use only for the exact `bug-hunter` shortcut or an explicit defect-hunt request. Prioritize reproducible bugs and smallest proof.\n- `repo-auditor`: Use for explicit repo-wide audit/refactor/dead-code/import/dependency-structure requests. Treat outputs as triage, not automatic delete lists.\n- `release-readiness`: Use for explicit release, merge, PR readiness, or handoff confidence requests. Do not run provider-backed gates without confirmation.\n- `branch-cleanup`: Use only when the prompt explicitly asks for branch cleanup/hygiene or branch deletion candidates. Apply `docs/branch-cleanup-guide.md` and the review ledger before inspecting branch diffs.\n- `pr-ci-fix`: Confirmation-required for this repo. GitHub/GitLab API calls, PR comments, CI reruns, commits, and pushes require explicit user approval and must respect the upload/handoff rules. Exception: an explicit `Run PR` sweep carries this approval (see \"## Run PR shortcut\").\n\nWhen a branch or PR review completes, record it with `npm run ledger:append -- --ref --head --scope --outcome --checks `. Never hand-write the markdown row: hand-written rows produced the mojibake, wrong-width, and duplicate records that the 2026-07-28 hygiene pass had to repair, and `see PR head` or abbreviated HEADs make a record unmatchable so the review runs again. The ledger is append-only: never edit or delete an existing record; append a correction or superseding record (`--supersede`) instead. Its `merge=ledger` driver preserves concurrent appends and drops exact duplicate rows; after a main sync without that driver installed, run `npm run ledger:dedupe`. `npm run check:branch-review-ledger` blocks conflict markers, duplicate records, mojibake, wrong-width or heading-style records, unresolvable HEADs, or loss of that merge protection.\n\nBabysit / Run PR ledger policy: do not push a tip whose sole delta is a babysit ledger append (that marks every other open PR behind). One Run PR row per PR per sweep; on a later sweep of the same PR, pass `--supersede` rather than stacking another \"main sync\" row. After `git merge origin/main`, run `npm run ledger:dedupe` before committing when the ledger changed.\n\n\n\n\n\n# Local server safety\n\n- If the user says `run`, execute `npm run ensure` and return the printed URL.\n- If the user asks for UI/frontend changes, browser QA, screenshots, mobile checks, or a local app link, run `npm run ensure` before opening or testing the app, even if the user did not say `run`.\n- Never assume `localhost:3000`, `localhost:3001`, or `localhost:3002`.\n- Never attach to a local server unless `/api/local-project-id` confirms it is this project.\n- Do not kill or modify other projects' local servers. If the stable project port is busy, let `npm run ensure` choose the next safe project URL.\n- Do not run a permanent watcher. Only start or verify the server when the current chat task needs the app or the user asks to run it.\n\n\n\n\n\n# Codex Desktop worktree setup\n\n- The Windows Codex Desktop environment setup command is `node scripts/setup-codex-worktree.mjs`.\n It must work before `node_modules` exists, validate Node 24/npm 11, reuse only a complete\n byte-identical local installation, and otherwise run the locked npm install.\n- Never configure Windows Desktop worktrees to run `bash scripts/setup-codex-cloud.sh`. That script\n is Linux/Cloud-only; Windows launches it through WSL outside the worktree and cannot provision the\n repository.\n- `.codex/environments/environment.toml` is autogenerated and ignored. Change the Database\n environment through Codex settings, then verify the effective command with the generated file and\n `node scripts/setup-codex-worktree.mjs --dry-run`.\n\n\n\n\n\n# Reasoning effort calibration\n\nReasoning effort is a budget in the same way verification is a budget, and it is misspent the same\nway — by defaulting to the maximum instead of matching the spend to the risk. **Scale effort to how\nexpensive the mistake is to undo (irreversibility × branching factor), never to the phase label.**\n\"Plan high, build lower\" is a good default, not a rule; it is wrong often enough that it must be\nchosen deliberately rather than assumed.\n\n**Why it is a good default.** Planning errors compound and implementation errors stay local: a wrong\napproach throws away the build, a wrong identifier is one edit. A plan is also a few thousand output\ntokens against a build's many long turns, so effort is cheapest exactly where it has the most leverage.\n\n**The mechanism that makes it work — do not skip this part.** A lower-effort build only succeeds\nagainst a plan concrete enough to execute: named files, named symbols, ordered steps, and the gate\nthat will prove it. Downgrading the build against a vague plan does not save effort, it relocates the\nthinking into the expensive phase. If the plan cannot name those things, the build is not eligible for\nthe downgrade.\n\n| Situation | Plan | Build |\n| ---------------------------------------------------------------------------------------------- | ----------- | ----------- |\n| Architecture, Supabase migrations/RLS, RAG ranking surfaces, auth/privacy, ingestion contracts | xhigh | high |\n| Ordinary feature or UI work with a clear shape | high | medium–high |\n| Mechanical and fully specified — ledger append, docs edit, rename (not dependency maintenance) | low or skip | medium |\n| Debugging an unknown failure | low | high |\n\n**Where the default inverts and the build needs more than the plan.** These are plan-light and\nexecution-heavy; treating them as plan-heavy spends the budget in the wrong place:\n\n- **Debugging.** The plan is \"find why X fails.\" The real reasoning is hypothesis-forming over local\n runtime, logs, and repro state during the build — hosted providers still need explicit confirmation.\n- **Constraint-dense implementation.** A one-sentence plan whose edit must simultaneously satisfy\n button wiring, design tokens, the one-composer rule, unlayered CSS, and the tap-target and\n phone-chrome contracts. Holding all of it at once is the hard part, not deciding what to do.\n- **Areas where training data is stale.** Next 16 is the standing case. Effort does not repair a wrong\n prior — reading `node_modules/next/dist/docs/` does. Raising effort instead of reading is itself the\n failure mode.\n\n**Constrain xhigh planning output, not just its effort.** Extra-high planning over-produces:\nalternatives, contingency branches, and surveys that are never used, paid for twice — once generating\nand once reading. Ask for the chosen approach, the files, and the gate, not a survey.\n\n**State the split before non-trivial planning work.** One line before starting: plan effort, build\neffort, and the risk that justifies them. It is cheap, it makes a wrong allocation visible while it is\nstill free to change, and it stops the blanket default from being applied silently.\n\n\n\n\n\n# Process hardening phases\n\n- **Verification principle:** run the smallest check capable of detecting a plausible regression introduced by the current diff. Before starting a check, identify the failure class it covers, whether a successful check already covered that class, whether a cheaper focused check offers comparable detection, and whether the incremental confidence justifies the runtime, resource use, and repository-lock contention. If there is no plausible changed failure path, do not run the check.\n\n| Tier | Use when | Default evidence |\n| ----------------------- | ----------------------------------------------------------------------------------------------------------------------------------- | -------------------------------------------------------------------------------------------------------------------- |\n| 0 — No test command | Explanation, planning, prompt writing, read-only inspection, or no repository change | No test, build, server, or baseline command |\n| 1 — Static/focused | Documentation, comments, metadata, or narrow non-behavioural configuration | Relevant format, docs, syntax, generated-file, or diff check only |\n| 2 — Focused behavioural | A localized helper, component, contract, or test change | Directly affected unit/DOM/contract test; add typecheck only when the edit can affect compilation or a type contract |\n| 3 — Domain gate | Shared UI/routing, dependencies, security, privacy, RAG, clinical output, production configuration, or another cross-cutting domain | The smallest applicable repository/domain selector, focused journey, or contract gate |\n| 4 — Broad handoff | The diff crosses multiple subsystems, cannot be bounded reliably, or the task explicitly requires PR/release confidence | One appropriate broad gate, selected rather than stacked by default |\n\n- Do not run a broad baseline routinely before localized work, and do not select `verify:cheap` merely because a change is described as “non-trivial.” Use `npm run verify:cheap` once when cross-module risk warrants a broad offline gate. Use `npm run verify:pr-local` when a change is ready for PR handoff: it now classifies the changed paths, runs focused documentation/workflow contracts for recognised low-risk scopes, and fails closed to lint, typecheck, the full unit suite, RAG fixture validation, and relevant build/domain gates for executable or unknown scope. If the diff has not changed, do not run `verify:cheap` first merely to repeat the same coverage.\n- Do not stack focused tests, full tests, typecheck, lint, build, and browser checks unless each catches a distinct plausible regression. Do not rerun an unchanged successful gate. A deliberately skipped low-yield broad gate is not automatically verification debt; report the skipped check and its risk-based reason concisely.\n- A fast-fail subset may precede a broader required gate only when the later gate excludes that subset for the same event; retain a fail-safe full path whenever the subset is skipped. Likewise, do not pre-run a build, install, or server setup that the selected wrapper performs itself. Guard these disjoint/fallback rules with workflow contract tests so a later edit cannot silently restore duplicate work or create a coverage hole.\n- Use dry-run selectors before expensive gates when scope is uncertain. `npm run verify:pr-local -- --dry-run --files ` inspects PR-local selection without running commands. The broader `--extended` plan is dry-run only unless explicit approval is reflected by `ALLOW_EXTENDED_PR_LOCAL=true`.\n- CI uses the same fail-closed scope model: recognised docs and workflow/policy-only changes run focused contracts; executable product/test/config, dependency, database, container, RAG, security-sensitive, mixed, or unknown paths retain the applicable heavy jobs. Do not broaden a path trigger or restore an always-on heavy job without evidence that the focused route misses a realistic failure class. Scheduled drift/release checks and the always-reporting `PR required` aggregate remain safety backstops.\n- Let the repository run coordinator control cross-worktree verification. It permits at most two focused Vitest/read-only typecheck leases from different worktrees; full Vitest, coverage, lint, build, Playwright, and live-provider tests remain exclusive. Do not install while a repository test, build, lint, typecheck, or server command is active. Avoid aggressive short-interval polling, and do not repeat an unchanged full gate after it passes.\n- For UI, frontend, browser, routing, styling, reduced-motion, or forced-colors behaviour changes, run `npm run ensure` before browser work and prove the changed owner or journey first. Use `npm run verify:ui` when shared UI foundations changed or PR/handoff policy requires the complete Chromium gate, not as an automatic addition after focused proof. For phone-chrome changes, run `npm run verify:phone-chrome` first: it checks installed-lock parity, selects the affected browser/PWA owners and exact journeys, and adds `verify:ui` last only when shared chrome foundations make the broad gate necessary. Inspect uncertain scope with `-- --dry-run`. Chromium evidence does not close physical Safari or installed-PWA acceptance gaps.\n- **Run `npm run format` and commit the result before every push.** Formatting is in neither `npm run test`, `npm run typecheck`, nor `npm run lint`, so the ordinary loop can report green while the changed-file CI check or exact-commit pre-push guard fails. Three CI failures on 2026-07-30 came from exactly this (two of them on `ci/circleci: verify`, since removed from the repo by PR #1412). Two traps beyond simply running it:\n - **Formatting without committing does nothing for the push.** A push sends commits, not your working tree, so formatting after committing leaves the unformatted blob on the branch. Amend or add a follow-up commit.\n - **A per-file check is not the repository-wide check.** `prettier --check ` on the source file you edited passes while a doc or ledger edit in the same push fails; that was the missed file twice out of three.\n\n `.githooks/pre-push` carries the guard, and since 2026-07-30 it checks the pushed commit where CI checks it: `guard-push.mjs` puts the pushed SHA in a temporary `git worktree` with an exact-lock `node_modules` linked in and runs Prettier there, so neither the working tree's contents nor its prettier config can vouch for the commit, and a dynamic `prettier.config.*` still loads. An isolated worktree without local dependencies may reuse Prettier only from a registered worktree with a byte-identical lockfile and matching installed Prettier version; if none exists, the guard blocks with the explicit `npm ci --include=dev` remediation instead of skipping formatting. A push that changes prettier policy (`.prettierrc*`, `.prettierignore`, `.editorconfig`, or a `package.json` carrying a `prettier` field) escalates to a whole-tree `prettier --check .`, because a policy change alters the verdict for files the push never touched. But `core.hooksPath` is set by this checkout's `npm install`, so an agent pushing from its own environment bypasses the hook entirely and only CI catches the break — which is why the rule above is still a rule.\n\n- For explicit release confidence, use `npm run verify:release` once; this includes the full Playwright project set and retains all provider-approval requirements. Ordinary local completion or PR handoff does not by itself authorize or require this release gate.\n- For clinical ingestion, answer generation, source governance, privacy, production-readiness, or environment changes, run the smallest relevant domain check plus `npm run check:production-readiness`.\n- For pull requests that touch ingestion, answer generation, search/ranking, source rendering, document access, privacy, production env, or clinical output, complete the clinical governance preflight in `.github/pull_request_template.md`.\n- Track known verification debts and staged process improvements in `docs/process-hardening.md` instead of relying on chat-only memory.\n\n\n\n\n\n# Page and button wiring\n\nInteractive controls and routes follow conventions the codebase already holds to. Before adding\nor moving a button, link, or route, read `docs/wiring-conventions.md`. A control that advertises an\naction must perform one; a page that ships must be reachable.\n\n- **Buttons.** Every interactive `